Hydractinia symbiolongicarpus: 130630928
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Entry
130630928 CDS
T09218
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A/B-like
KO
K14411
RNA-binding protein Musashi
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130630928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130630928
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130630928
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
130630928
NCBI-ProteinID:
XP_057300341
LinkDB
All DBs
Position
1:3698556..3711232
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AA seq
394 aa
AA seq
DB search
MIPGFPITYYPIGGQFPTQLSDDAGKIFVGGIPADATKETLTDYFSQFGEVSDCIIMVDN
ITGRSRGFGFVTFLEAITVNKVLGHLKHSINGKIVDAKRAVPKGPNQGTILRAMGITSNR
ADRNPDCKVFVGGVAQGTTESDLEQYFQEFGKVLEVKIPKDQNTQRARGFSFVLFENADC
VINATKERFHRINGKMVEVKTVQVPNKNQFDKDSDDGHMRSSPSPFLQIGQRPNYYQAYH
QSYLGVNHGMSPHGFYEPPYEPSPSGSTGSAASIGSAGYGNVSAAATSGQRLDEYPYMTP
LYPAMNDLSISPQYPRIKNYTAYRAPQYMPSGDQLSSSYGGLPGAPTPSSVAYHSELSSY
GSSSPGYGAMGGHGMPYNPASTPQAVPSVQTFSR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgataccaggctttccaataacttactaccccattggtgggcagttcccaactcaactt
tcagacgatgcaggtaaaatatttgttggaggaatccctgctgatgcaacaaaagaaacc
cttactgactatttttctcagtttggagaagtgtcagactgcattattatggtagataac
attacaggaagatccaggggttttggatttgtcaccttcttagaagcaataacagtaaat
aaagtcctgggacacttgaaacattctataaatggaaaaattgttgatgccaagagagct
gttcctaagggacctaatcaaggcacaatacttcgagctatgggtataacttcaaatcga
gctgatcgcaatcctgattgcaaagtgtttgtagggggtgtggcacaaggtaccactgaa
tcagatttagaacaatattttcaagaatttgggaaggtccttgaggtaaaaatacctaaa
gatcaaaacactcaaagagcacgcggtttctcatttgtactttttgaaaatgctgattgt
gttataaatgctactaaggaacgcttccatcggattaatggaaaaatggttgaagtaaaa
actgtacaagttccaaataaaaatcagtttgacaaagacagtgatgacggccatatgcgc
agttcaccttcaccatttctgcaaataggacagcgaccaaattattatcaagcgtaccat
caaagttatctaggtgtcaaccatggaatgagtccacatggtttttatgaaccgccatat
gaaccatcaccaagtggaagcacgggatcggctgcatcaattggatctgccggatatggg
aatgtcagtgcagccgcaactagtggacaacgacttgatgaatatccgtatatgactcca
ttatatcctgcaatgaatgatctttctatcagcccacaatatcctcgaataaaaaattat
acagcttatcgtgcaccccaatacatgccatctggagatcaattatcaagcagctatggt
ggattacctggagctcccacaccatcttcggttgcatatcacagtgaattatctagctac
ggatcctcatcgccaggctatggggctatgggtggtcatgggatgccatataatcctgct
agtacaccgcaagcagtaccttctgtgcaaacgttcagcagatga
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