Hydractinia symbiolongicarpus: 130631113
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Entry
130631113 CDS
T09218
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsy03016
]
130631113
Enzymes [BR:
hsy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
130631113
Transfer RNA biogenesis [BR:
hsy03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130631113
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_28
zf-C3Hc3H
FHIPEP
Motif
Other DBs
NCBI-GeneID:
130631113
NCBI-ProteinID:
XP_057300356
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All DBs
Position
1:complement(3871298..3883347)
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AA seq
474 aa
AA seq
DB search
MDDKEIKILTCNNIKPPVEGRCGFFVKRKQRYCKMLPAKGNRYCAEHLSQDKQQDENRKR
KRIDCPLDPKHTVFEDKLSKHLKKCNATLKTQLHYFSNNINLGIPDYIISEEEKVTLYHT
PVEVLQQLITKVKECYRNITMETVKENHKQHPVLDEEMSQPGYGASVKKHLIQQASLVSL
LDDMNVLQNSMAVIEFGAGRGALSHWIQKAMADQLDSKFFLVDRQHNRNKLDCYHKGDDQ
GPNFERLNIDIQHLNLANVLPLTNSELEIVGVGKHLCGGATDLSLRCLFENQEKETKEEQ
PSKRIKKGSIASRIHSILFALCCYHRCTWSTYVGTKYLSDKGFSSLDFHRITKMAGWATC
GFERRTTETQKDDDRVAEEKISKEHEDRAVEEENSKEHDDRAVEKKNLKVHAGLGLTSHE
QEEIGRMCKRIIDHGRLEYIRSYGYRCELIKYVDKEITPENIALCVRRRKTNDS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaagaaataaaaattttaacttgtaacaatatcaagccaccagtggaaggt
cgatgcggattttttgtcaaacgtaaacaacgatactgtaagatgttgccagcgaagggt
aacagatactgtgcagaacatttaagtcaagataagcaacaggacgaaaatcgtaaaaga
aaaagaatagattgtccacttgatccaaaacacacagtatttgaagacaagttatcaaag
catttaaagaaatgcaacgctacgcttaaaacacaactgcattacttcagcaacaacata
aatttgggtataccagattatatcatttctgaagaggaaaaggtaactctatatcacaca
ccagtcgaagtcttacagcaacttattacaaaggtgaaagaatgctatagaaatatcacc
atggaaacagtgaaggagaaccacaaacaacatccagtgcttgatgaagaaatgagtcag
ccaggatatggtgcttctgttaaaaaacatctaattcaacaagcttcattagtcagtcta
cttgatgatatgaatgttttacaaaacagcatggctgtcattgagtttggcgctggtaga
ggtgcgctttctcattggatacaaaaagccatggccgatcaattagattcaaagtttttc
ttagttgatcgtcaacacaacagaaataagttggattgttaccacaaaggtgatgaccaa
ggtccaaactttgaaaggttaaacattgatatccagcatctcaatcttgcaaatgttcta
ccgttgacaaatagtgaattggaaattgtaggtgttggaaagcatctctgtggtggagca
acagatctctctcttagatgtttatttgaaaatcaggaaaaagaaaccaaggaggagcaa
ccttcaaaacggataaagaaaggttccatagcgtcacgaatacactccatcttatttgct
ttatgttgttatcaccgttgtacatggtcgacttacgttggcacaaaatacctctctgat
aaaggtttttcttcgcttgattttcatcgaataacaaagatggctggctgggcgacatgt
ggttttgaacgcagaacaacagaaacccagaaagatgatgatcgcgtagccgaagagaaa
atttcaaaagagcatgaagatcgcgcggtcgaagaggaaaattcaaaagagcatgacgat
cgcgcggtcgaaaagaaaaatttaaaagtgcatgctggtcttggtttaacatcacatgaa
caagaagaaatcggacgtatgtgtaaacgcataatcgatcacggacgattagaatatata
cgtagctatggttaccgctgtgaacttataaaatacgtcgataaagaaatcactccggaa
aatatagcgttatgtgtgcgacgacgtaaaaccaacgacagctga
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