Hydractinia symbiolongicarpus: 130632181
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Entry
130632181 CDS
T09218
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130632181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130632181
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
130632181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
OB_HELZ2
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
130632181
NCBI-ProteinID:
XP_057300437
LinkDB
All DBs
Position
1:complement(4529578..4552133)
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AA seq
1057 aa
AA seq
DB search
MQYLNVYFFDMSKVEKLKKMIKTEKLVSIKKSSKNLVSVVREHYLRNDIPCKSRRCKLCQ
QPTGMSMLPADTTHYVIPDCQVTKKYLEIFQLKELTGLIFLQTVKNFVQYSCGRNLLRDL
NKLIKDTTKESIFFDNEFHKACYVERKHGDNIDKWRMNIIYQFAVWYFQHLDEEIPIIII
TNDENAKKDYGNKTHHVFVLSMDEYITSFWPDLTDAHNLLESLNVSSTVDIKVGDAICKE
FQEYYPSLVLQSGIKSGRFISSYLKVNKHNPNREAFIQTSTTKNSSSVTSVDIFIPGTVF
RNRSIDGDLVVVELLPKDQWQSRSASLVGSDTESATAQDSTTMMTGRVVGILQRNSRDFV
VTIPDREESVKKTTEKILTVPWDVRIPKIRISTRQASKLKDSRFIVRIDSWETSSLYPNG
HFVKLLGPIGDIETEISTILMEHSLVVAPFSEGILKEMPIRTRGDFWEMENEEMMRRKDL
RNSHLIFSIDPQGCEDVDDTLSVRQLSNGRVELGVHIADVTHFVKTNSLTDSEARSKTTT
VYLADRRYDMLPDVLSADLCSLISGVDRYAVSVIWTLDANYEVVDVWYGRTVIRSKYKLF
YEAAQQIADGEMKLKEAVENIPELKLIQNDKQQNKDFQEMKEAIIMLMSIARHLKAKRSD
SGAVDLVSTEVQIQVIDSKEVKNLLPKKPLEVHETIAEIMIFANHWVAKKIKDTYKNFAL
LRNHPAPKQDGFDSLKDCAKAKGFNVNTSSNQNLAASLDECNDRDPNFNKILRMLATQAM
MVASYFSTGSVEADKYYHYGLALDSYTHFTSPIRRYADVLVHRLLLASVNDPTAEISSLL
GNKELHELCDHINMKHREADHAQKESVKLFQAMYFRQHIDDETCIVDALVYNLRTNGALI
FIPKYSIKGAVFLKNKEGLVCTPYDGNTVKFLKGQLCKEANKIVITYDSGSINVALFSYL
KVRISVKSCKTHSDQLHFDVVSFKSDVHLQKDVTKVERNELIHNVKKKNEEKKNTAETNE
EEIKKIELKKKYGQTHKSVSLYELFQSFKKTAILEKT
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatttaaatgtatatttttttgatatgagtaaggtagaaaaactaaaaaagatg
atcaaaacagagaaactcgtttccatcaagaaaagcagtaaaaacttggtcagcgttgtc
cgtgagcattatcttaggaacgatataccatgcaaaagcagacgatgcaaactgtgtcaa
caaccaacaggaatgtctatgctacctgcagatacgacacattatgttattcctgactgt
caagtgacaaagaagtacctagagatttttcaactaaaagaactaacagggctgatattt
cttcaaacagtgaaaaactttgttcaatactcttgtggaagaaatttgctcagagattta
aacaagttaataaaagacacaacaaaggagtccatatttttcgacaatgagtttcacaaa
gcatgctatgtagaacgcaaacatggtgacaatattgacaaatggcgaatgaacattatt
taccaatttgctgtttggtattttcaacacttagatgaagaaattcctatcattataatt
actaatgatgaaaatgcaaagaaagactatgggaataagacccatcatgtttttgtttta
tcaatggatgagtacattacaagcttttggcctgacctaactgatgcacataatctgcta
gaatctctcaatgtgtcatcaacagttgacataaaagttggtgatgcaatttgcaaagaa
tttcaagagtactatccatcacttgtgttacaatctggaatcaaatctggtagatttatt
tccagttatcttaaagtcaacaaacacaatcctaacagagaagcatttattcaaacaagc
actacaaaaaattcctcatctgttacatcagtggatatattcatacctggcacagttttt
cgtaaccgatccatcgatggggatcttgttgttgtagaattacttccaaaagatcaatgg
caatcgcgttcagcttctcttgttggctctgacacagagtctgctactgcgcaggactca
acaaccatgatgacaggacgtgtagtcggaattttacaaagaaattctcgtgattttgtt
gtgacaataccagatagggaggaatctgtgaaaaaaactactgagaaaatactaaccgtt
ccatgggatgtcagaatacctaagattagaatcagtactagacaagcctctaaactaaaa
gattctagatttattgttcgtatcgattcatgggagacaagttcgttatatccaaatgga
catttcgtgaagttgttaggaccaattggtgatattgaaacagagatatctaccatttta
atggaacactcgttggtagttgcaccattcagtgagggaattttaaaggaaatgccaata
agaacaaggggtgatttttgggagatggagaacgaagaaatgatgaggagaaaagatctc
aggaattctcatctcatattcagtatagatccacaaggatgcgaggatgtcgatgatacc
ttatctgttcgacaattatcaaatggtagggtagaacttggtgtacacatagcagacgtt
acacattttgtgaaaacaaacagtttaactgactcggaagcgagatctaaaactactaca
gtttatttagcagacagaagatatgatatgttacctgatgtacttagtgcagatttatgt
tcccttataagtggtgtggacagatatgctgtcagtgttatctggactcttgatgcaaat
tatgaagttgttgatgtatggtatggtcgtactgtcatcagatcaaaatataaattgttt
tatgaggcagctcaacaaattgctgatggtgaaatgaaactgaaagaagctgtggagaat
attcctgaattaaaattgattcaaaatgataaacaacaaaataaagattttcaagaaatg
aaagaggctatcataatgttaatgagtattgctagacatttgaaagctaaaaggtcagac
agtggtgcagtcgatttggtgagcactgaagttcagattcaagttatagactcaaaagaa
gttaaaaatcttcttccgaagaaaccactggaggtgcatgaaacaatagcagaaattatg
atattcgctaatcactgggtggcgaaaaagattaaagacacatataagaattttgcactg
ctgcgaaatcatccagcaccaaaacaggacggttttgactctttgaaagattgtgcaaaa
gctaaaggcttcaatgtcaacacgagttccaaccaaaatcttgctgcgtcattggatgaa
tgtaatgaccgtgacccaaactttaataagatattacgtatgctagctactcaagctatg
atggtagcttcatatttttcaacgggatctgtggaagcagacaaatactatcattatggt
ttggcgttggattcatatacacatttcacgtcgcctattcgaagatatgctgatgtattg
gttcatcgtttactcctagctagtgttaacgatcccacagcagaaatatctagtttgcta
ggaaacaaagaattacacgagttgtgtgaccatattaatatgaaacacagggaagcggac
catgcccaaaaagaatctgtaaagctgtttcaagcaatgtactttagacaacatattgat
gacgaaacttgtattgtggatgctttggtatataatttacggaccaacggcgctctgata
ttcattcctaaatacagtataaagggagcagtgtttttaaaaaacaaagaaggattggta
tgtacaccctatgatgggaatacggtgaaatttttgaaaggccaactttgtaaagaagca
aacaaaatcgtgataacatatgattctggatcgatcaatgtggctttgttttcttattta
aaagttcggataagtgtaaagagttgtaaaacacattccgaccaacttcactttgatgtt
gtttcgtttaaatctgatgttcacctgcagaaggacgtcacgaaagttgaacgaaatgaa
ttgattcataatgtgaaaaaaaagaatgaagaaaagaaaaatactgcggaaactaacgaa
gaagaaataaagaaaatagaattaaagaaaaaatatggacaaacgcataaaagtgtcagt
ttgtatgaattatttcaaagtttcaagaagactgctatattagaaaaaacttag
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