Hydractinia symbiolongicarpus: 130633435
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Entry
130633435 CDS
T09218
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130633435
03036 Chromosome and associated proteins [BR:
hsy03036
]
130633435
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
130633435
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
130633435
SLIK complex
130633435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
BRR2_plug
AAA_22
Motif
Other DBs
NCBI-GeneID:
130633435
NCBI-ProteinID:
XP_057300534
LinkDB
All DBs
Position
1:5450233..5494611
Genome browser
AA seq
1799 aa
AA seq
DB search
MGQEDDSASSLSEEEVEDSHHIKDGQNSWEEDSSSDSSDANDGEEVEIADSDNQQTLEQQ
KILQKVGSPEQEKSENSSSGSSSGSSSSDGSESDSDNPQAEDDKRKPKKDDKKIWEENPD
VYGIRRSNRARKEPQRLVIQSGSDSDDSGKKKRKGRRKSESWIPTLSGSESEESDSSFDV
PQKVTQKRSKPTSGSRKRRKQQRGRTVSTSSDEYGKKGRGKKKSHYVGGARRNTLNKVSY
KEDSEDETDSDDLVEYDEKQTDIPTEPVETIEKVMRHRKGRPEEIGAQTTIYSPENEEFA
KKGEPDPENETVELQFLIKWKTWSHLHNTWETKKSLTEQKCGGIKKLENYIKRMDEIEKW
KKISSPEDVEYFECQSEMNEDIQKQYQKVERIISHQFMPESDSSYPDYLCKWQGLPYSDC
TWEDGNLTARFFQSYIDEYLERERSDTIPNKNAKCLRHRPKFVPLKKQPDYLGNSDLQLR
DYQLDGVNWLAHAWSRELSVILSDEMGLGKTIQTISFLSYLFHTHSLYGPFLVVVPLSTM
DAWQREFQLWGPDMNLIVYIGDVNSRTNIQEYEWCFKKNRKLKFNVLLTTYEMLLRDKEL
LGSLYWAALLVDEAHRLKNDDSLLYRMLIDFRTNFRLLITGTPLQNSLKELWSLMHFIMP
NRFDEWSDFESEYSVSDKEGLQKLHRDLEPYLLRRVKKDVEKSLPAKVEQILRMEMSQVQ
KQYYKLILTKNVQELCRELKGSFSGLLNIIVELKKCCNHSNLIKPLDLMNEDPNMLQTLI
KGSGKMILLDKLLCRLKETGHRVLIFSQMVRMLDIIADYLYMKRFMFQRLDGSIRGEQRR
RALDHFNAEGSQDFCFLLSTRAGGLGINLASADTVIIFDSDWNPQNDLQAMARAHRIGQK
NQVNIYRFVTKNTIEEDIIERAKKKMVLDHLIIQRMDTTGRRILSKSSTAPSSNAPFNKE
ELSSILKFGAEDLFKDADQDQDQKLHAMDIDEILQRAETQEHQDNLPSVGEELLSQFKVV
NYAAFNEEEIKPTPTANPMQKLWEEIIPEEERKKAEEEREKEKKAELTLKPRSRKTVEKM
NIGQTSNNKKVKSKAIVDTDTSSDSDDDSVEENDVDEAKGKKATKRQTKSKPVKKEGVKG
FSDVEIRRFIKSYKTFARPMTRLDSIAEDAELTDKSVNELKELGELLKSSCEQAVKDYQE
KLLQDEQFDGKKKGASLKISGVTINAPSVLKAEVDLEPLALCLPQEPRQQKGYRLTHPTR
SVHWGISWGVVEDSMLLIGMLKYGVGNWDAIKNDHALGLSGKILPMGNGKPQNKHLQSRA
DYLLKLLKEQKTHHEPEQKKKKIKVRPHKQEDYVSPHSESEHTISNTLNEQKPSKKKKTK
KTVEKKNAKTLKKEKTRDERISSPAVPEENPVVVMDFREEMAEETFKKCKEKMRPEKKSL
QQLDSPDQKSTPKEQVQTTKKCLLKIGDHIERCLDEYMKDPNELDVWRSNLWSFVAKFTE
LGPAKLHKLYRAAARKRDVQRDEQKKEIQKLKINYTQSLHEIGKHLPPDRLELEKARKKA
LGLNANNPASAKIPKLNKIKIPHKKKEKDGTNNNNKNTVPNYKMHESRDGYRGRHGGEKM
SENWRHRNKPYNREQAPNYNTSQKLILDNESGNTVKTQTYREWKEAQKARLAAEEKAPLK
ENRQKTYKDKPYYGDEKPHNTEKHYGDEKAPFKHEQYTSYDPRSKPRYHRDSQEYSGEYS
ISPSYIKSPSASLSPHSYVDSWSRKRTSSNNSEFVATKKLHRDPESSNSNQSWATGGNT
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgggacaggaagatgattcagcttccagtttaagtgaggaagaagtggaagactctcat
cacattaaagatgggcaaaactcatgggaggaagattcaagcagtgactccagtgacgca
aatgatggtgaagaagtggagatagcagactcagacaaccaacaaactttagagcaacaa
aaaatattacaaaaagttggaagtccagaacaagagaaatctgagaattcaagtagtgga
agtagcagtggaagcagcagcagtgatggtagcgagagtgattctgataatccacaagca
gaagacgataaaagaaaacctaaaaaagatgacaaaaagatttgggaagaaaatcctgat
gtttatggaatacggcgatccaatcgtgccaggaaagagccccaaagattagtaatacag
tctggtagtgacagtgatgacagtggaaagaaaaagagaaaaggtagaagaaaaagtgaa
agttggatccctacacttagtggaagtgaaagtgaagaatcagactcgagttttgacgtc
ccacaaaaagttactcagaaaaggtcaaaaccaacatcaggttcacgaaaaagacgaaag
caacaaagaggacgtacggtatcaacaagctctgatgaatacggtaaaaaaggccgtggg
aaaaaaaaatctcactatgttggtggggcaagaagaaatactttaaacaaagttagctat
aaggaagacagcgaggatgaaacagactcagatgatcttgttgaatatgatgaaaaacaa
actgatatacctactgaaccagttgaaactattgagaaggttatgcgtcatcgcaaaggc
agaccagaagaaattggagctcaaactactatatactctccagaaaacgaggaatttgca
aaaaaaggtgaacctgacccagaaaacgaaactgttgaacttcagttcttgattaaatgg
aaaacttggtctcatttacataacacatgggagacgaaaaaatctttaactgagcaaaag
tgtggagggatcaaaaaattggaaaattatataaaacgaatggatgaaatagagaaatgg
aaaaaaatctcatctcctgaagatgtggaatattttgaatgccaaagtgaaatgaatgaa
gatattcagaagcaatatcaaaaagtggaaagaattatctctcatcagtttatgccagaa
tcagattcttcatatcctgactatctctgcaagtggcaaggcttgccatactctgactgc
acttgggaagatgggaacttaactgcaaggttttttcaaagttatattgacgagtattta
gaacgtgaacgatctgacaccatacctaataaaaatgcgaaatgtttacgacatcgtcca
aagtttgtaccgttaaaaaagcagccagactatttaggaaattctgatctgcaactgcgt
gattatcagttagacggtgttaactggttggcacatgcttggagtcgagaactgtctgtt
attttatcggatgagatgggattaggcaaaaccattcaaactatttcttttttatcttac
ctgttccatactcactcattatacgggccatttcttgtcgttgtacccctttccaccatg
gatgcttggcaaagagaattccaactatgggggcctgatatgaacttaatagtttatatt
ggcgatgtcaattcgagaactaacatacaagaatatgaatggtgttttaaaaaaaacaga
aaactaaaatttaatgttttattgacaacgtatgagatgctgcttcgggacaaggagtta
ctcggttcactttattgggctgctttattggtagatgaagctcatcgcttaaaaaacgat
gactccttgttatacagaatgttgattgatttccgtacaaattttcgcttactgatcact
ggtacacccttgcaaaactctttgaaagaactttggtcgttgatgcattttattatgccg
aacaggtttgatgagtggtccgatttcgagtctgaatattcagtatctgataaagaaggt
cttcagaaacttcacagagatcttgaaccctatttattgagaagagtgaagaaggatgta
gaaaaatctcttccagctaaggttgaacaaattctcaggatggaaatgtcacaagtccaa
aaacagtactacaagttgatcctgacgaaaaatgtacaagagctatgtagagaacttaag
ggtagtttcagtggattgctaaatatcatagtggagctgaagaagtgctgtaaccatagc
aacttgataaaaccccttgacctgatgaatgaagaccccaacatgctacagacacttatc
aaaggaagcggaaagatgatactgttagacaaattgttgtgtcggttgaaagagacagga
catcgagttctgatcttctcacaaatggttcgaatgcttgacatcatcgctgactatctg
tatatgaaaagattcatgttccagagattagatggatcaatacgcggtgagcaacggagg
agagctttggatcattttaatgctgaaggttcacaggatttctgttttcttctctcaact
cgtgccggaggtctgggtattaacctcgcatcagcagatacagtaattatttttgactct
gattggaatccgcaaaatgatctgcaggccatggctcgagcgcacagaattggtcaaaaa
aatcaagtcaatatatacaggtttgttactaagaatacaattgaggaggatattattgag
cgagcaaagaagaagatggtgctcgatcatctcattatacaacgcatggacacaactggt
cgaagaatcttgtcgaagagtagcactgctccttcctctaacgcaccatttaacaaagag
gaattatcttctattctaaagtttggtgctgaagacctgtttaaagatgctgaccaagac
caggatcaaaagcttcatgctatggatatcgatgaaatcttgcagcgtgcagaaactcag
gagcatcaggataacttaccttcagttggcgaagaactgctttctcaattcaaggtggtt
aactatgcagcctttaacgaagaagaaattaaaccaactcctactgccaaccctatgcaa
aaattatgggaagaaatcattcctgaagaagaacgaaagaaagcggaagaagaaagagaa
aaagaaaagaaagctgagttgacgttaaagccaagaagtagaaaaactgtggagaagatg
aacattggtcaaacgtccaataataaaaaagtaaaatctaaagccatcgtggacactgat
acatctagcgattctgatgacgacagtgtggaggagaatgatgttgatgaagctaaaggt
aaaaaagcaacgaaacggcaaacgaaatccaaacctgtaaagaaggagggtgtcaaaggg
ttctccgacgtagaaataagaaggtttataaaaagctacaaaacgtttgcaagaccaatg
accaggctggattcgattgcagaagatgctgaacttacagataaatcggtgaacgaatta
aaagaactcggtgaattattgaagtcttcctgtgaacaagctgtaaaagattatcaagag
aagctgttgcaggacgaacaatttgacggtaaaaagaaaggtgcctctttgaagatatct
ggtgtcaccataaacgcgccatcggtgttaaaagcagaagtagatttagaaccactcgct
ttgtgcttaccacaagaaccccgacaacaaaaaggttaccgattgacccatcccacacgt
agcgtacattggggtatctcatggggcgtggtggaagattccatgttgttgattggtatg
ctgaagtatggtgttggcaattgggatgctatcaaaaatgatcatgcgttgggactttct
ggaaagatccttcccatgggaaatggcaagccgcaaaataaacatctccaatctcgcgca
gattatcttctgaaacttttaaaagaacagaaaactcatcatgaaccagaacagaaaaaa
aaaaaaataaaggttcgtccacacaaacaagaagattatgtatcgcctcactcagaaagc
gagcataccatctcaaatactctgaatgaacaaaaaccaagcaagaagaagaagactaaa
aagactgttgaaaagaagaatgcaaagacactcaaaaaagagaagactcgcgatgaacga
atctcaagtcctgccgtgccagaagaaaatccggtagtggtgatggactttcgagaagaa
atggccgaagaaacttttaagaagtgcaaagaaaaaatgcgcccggaaaagaagtcactc
caacaacttgattctcctgaccaaaaatctacgcccaaagaacaagtgcagacaacgaaa
aaatgtttgttaaaaatcggggaccatattgaaaggtgcttggacgagtacatgaaggac
cctaacgaacttgatgtatggcggagtaatctctggtcttttgttgcaaaatttaccgag
ttaggaccagcgaaacttcacaagctctatcgagcagctgctcgtaagagagacgtgcag
cgtgacgaacagaagaaagagattcaaaaactgaaaataaactacactcaatcacttcac
gagatcggaaaacatctccctccggatcgtttggagctggaaaaagcgagaaaaaaagcg
ttaggtttaaatgctaacaatcctgcatcggcaaagataccaaagttgaataaaattaaa
atacctcacaagaaaaaagaaaaagatggaacaaataacaataataaaaatacggtaccg
aattataagatgcatgaaagccgagatgggtaccgtggtcgacacggcggagagaagatg
agcgaaaattggcgtcatcgaaacaagccgtacaaccgagaacaggcaccaaactacaat
acttcacaaaagttaattctagacaacgaaagtggtaacaccgtcaaaacgcaaacatat
cgagaatggaaggaagctcagaaagcacggttagctgcggaagagaaagcaccgcttaag
gagaatagacaaaaaacatataaagataaaccttattacggagatgaaaaacctcataat
acggaaaaacactatggagatgaaaaagctccgtttaaacatgaacaatatacttcttac
gatccacgtagtaaacctcgctatcatcgcgattcgcaagaatattcgggagaatactca
atatctccatcgtatataaaatctccttcagcttctctttctccgcatagttacgttgat
tcttggtcgaggaaaagaacttcaagtaataatagtgaatttgttgctactaaaaagttg
catagagatccggaatcgtctaacagcaaccaatcgtgggcaacaggtgggaacacgtga
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integrated database retrieval system
