Hydractinia symbiolongicarpus: 130635590
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Entry
130635590 CDS
T09218
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130635590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsy03009
]
130635590
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
130635590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltr_RsmB-F
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
130635590
NCBI-ProteinID:
XP_057300935
LinkDB
All DBs
Position
3:complement(9523695..9528221)
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AA seq
298 aa
AA seq
DB search
MGRPGFGGGGRGGGRGGRGGFGGRGGGGRGGGGGRGGGFGGRGRGGGRGGGRGGMRGGRK
TVVEPHRHEGVFIARGKEDALVTLNLIPGNTVYGEKKVSIDGEEGAAKTEYRVWNPFRSK
LAAAILGGVDKIHMKPGAKVLYLGAASGTTVSHVSDIVGPEGLVYAVEFSHRSGRDLLNV
AKQRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQARIVAINAHNFLKNGGHFVIS
IKANCIDSTAAPAAVFAGEVKKLQSEKLKPQEQLTLEPYERDHAVVVGTYRAPPKKKD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggtagacctggttttggtggtggcggacgtggtggtggaagaggaggcagaggtggt
tttggtggccgtggcggtggaggaagaggaggtggtggtggaagaggtgggggttttggt
ggacgaggtagaggtggtggtcgtggtggtggacgaggaggaatgagaggtggaagaaaa
acagttgttgaaccacatcgtcatgaaggtgtattcattgccagagggaaagaggatgcg
ttggttacattaaatttgatacctggcaacactgtgtatggagaaaagaaagtttccata
gatggagaagaaggagctgccaaaactgaatacagagtctggaatccatttcgttcgaaa
ttagcagcagctatattaggcggtgttgataaaattcacatgaaacctggtgctaaagta
ctgtatttgggagcagcttctggaaccactgtgtcacatgtctcagacatagtcggacct
gaaggtcttgtgtatgctgtagagttttcacatcgttctggacgtgacttgttaaatgtg
gccaaacaaaggacaaatattattccaattatcgaagatgctcgccatcctcataaatat
agaatgttagttggtatggtagatacaatatttgctgatgttgctcaaccagatcaagct
cgtattgttgctatcaacgcgcacaactttttaaagaatggtggacattttgttatatct
atcaaggcaaactgcattgattctactgctgcaccggctgcagtattcgcaggagaagta
aagaaattgcaatctgagaaactaaaaccgcaagaacaactcacattggaaccttacgaa
agagaccacgcagtcgttgttggaacatacagagccccaccaaagaagaaggattga
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