Hydractinia symbiolongicarpus: 130635625
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Entry
130635625 CDS
T09218
Name
(RefSeq) putative elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsy03016
]
130635625
Transfer RNA biogenesis [BR:
hsy03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
130635625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
HB_ELP1
TPR_ELP1
Beta-prop_WDR19_1st
DPPIV_N
Beta-prop_WDR35_TULP_N
Beta-prop_EML_2
Tox-PL-2
PH_RDR2
Motif
Other DBs
NCBI-GeneID:
130635625
NCBI-ProteinID:
XP_057300998
LinkDB
All DBs
Position
1:7554623..7585592
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AA seq
1275 aa
AA seq
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MKNLVLLENLIADTAIKDANMLACDNMNDVIYIATSTTVTGYHTVDKQLENFISLVEHDY
LEANGKEKIKSLHYLFDQESVCISTTKGDLLLWQPEMNNIECVGSVDAGFTCAQWSPDHE
LLVLTTGNDTFVLMTKDFDAICEHNQHSQEFGEAMPVNVGWGKKETQFHGSEGKEAAQQK
ENKVSQILSLDDKRTEVSWRGDGQYFCISSVNRNEDRRYVRIYDRDGTLQATNEVLEGLE
NFISWRPSGNLIATSQQKPNKHDIIFLEKNGLQHGEFTLPYNKDQKVIVEMSWNMDSDVF
TLILRDTVSGMFSVQLWTVNNYHWYLKQEINTGDSQPCVTWDPEDSYKLHILKSDGIYMQ
HIYKYDIIQSMGEDHLSMVAVIDGMKLLLTPFKKMILPPPMAAHTINLDCSINLVAFGVD
TTRHDIITQVSDSSFYLMKYTEENAYDKPIKLQSRDELMSCCLRCIVWLKENLIAALVDD
TEGNYVLFLSLSEENSKVCLNISSKLRVTENLIMLFRSEDSQQCLLAQDWRGHILRINQE
SYTVTDCSLPQGCSRVACTKFNGEDIAFGLTKHHRLFMNKKEIASNCTSFLLHEEFLLLT
THSHTLRSVYLNSLAKVTKLDDECTYCVDEAVRRVERGSKLVTAVHQGTAVVLQMPRGNL
ECIHPRALVVSCLQKLLNNLNYEKAFEVMRRNRINLNLIYDHNPKLFLENVNKFIKDIPT
INYLNLFLADLTPEDVCSTLYFPFYQHGEVATDANRKKTSSTKVDIVCQAVRDAIERSGN
EKYFLALLTTYAKQSSPDLEMVLMKIKHLKDHPSNENNSVSYDKALNYILYLIDVNQLFD
IALGLYDFKIVLMVAERSQKDPKEYLPFLNNFRNMETNYQHYSIDKYLKKYQKALVSLVK
CEDCFNECLEFVKEQKLHRQALKLFPVTSEQYRKLSLQYGEYLRQQKLHEDAGIVLSRSG
HHREALEAFLQTNNWSMVLTEAKELAYPNDQIIKLCRELSEKLKSNRLYDEAAFLLEVYV
QDVEECVVCFLDGGLWFKALQLIKKHERDDLIETNLKPSIHNHYEQTVEKLEDLQAKFKT
YESRLKVVVEKKARENMEILEGVRDDPDNDLYSDISSITGQSVTTASSKGSRSSGHSRKS
RSKVARKKYSLREGSKHEDFALREALAEIVRTSDQMKEEVSALLKALVLYHFEEKASNLQ
NLLNELLQLIETKIKEIWNNESTSNDAVSTYGPEATVQSILAQRHNVPAIEKDQLPPATR
PVVRDINWKLHLLRI
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctagtattgctagaaaatcttattgcagatactgctattaaggatgcaaat
atgttagcatgtgacaatatgaatgatgtcatatatattgctacaagcacaacagttact
ggctaccataccgttgataaacaactagaaaacttcatatccttggtagagcatgattat
ttagaagcaaatgggaaagaaaaaatcaaaagtttgcattatctttttgaccaagaaagt
gtttgtatttcgacaactaaaggtgacttactgctatggcaaccagaaatgaacaatatt
gaatgtgttggaagtgttgatgcaggtttcacatgcgcacaatggagtccagatcacgaa
ttacttgtactcacaacaggaaatgacacgtttgttttgatgacaaaagattttgatgca
atatgtgagcataaccaacactctcaagagtttggggaagcaatgcctgttaatgttggt
tggggtaaaaaggaaactcaattccatggatcagaaggaaaagaggcagctcaacaaaaa
gaaaacaaggtatctcaaatattgtctttagacgacaaaagaacagaagtatcttggcgt
ggggatgggcagtatttctgtatatcatctgtcaatagaaatgaagaccgaaggtatgtt
aggatatatgatcgtgatggtaccctccaagctacaaatgaagttttggaaggactggaa
aattttatttcttggagaccttctggtaacttaattgcaacgtctcaacagaagccgaat
aaacacgatattattttcttagaaaagaacggattacaacatggtgaatttacattaccg
tataacaaagaccaaaaagttattgttgaaatgagttggaatatggattctgatgtattt
acattgatattgagagacacagtgtctggaatgttctctgttcaactttggacagttaat
aattatcattggtatttaaaacaagaaataaatacaggtgactcacaaccttgtgtcact
tgggacccagaagatagctacaaacttcatatattaaaatcagatggtatttacatgcaa
catatttataaatatgacatcattcaaagcatgggagaagaccacttgtccatggtggct
gttattgatggaatgaaattattgcttacaccgtttaagaaaatgatccttccaccaccc
atggctgcacatactatcaatctagactgttcaataaaccttgttgcatttggtgttgac
acaaccagacacgacattatcacacaagtctctgatagcagcttttatcttatgaaatac
accgaagagaatgcttacgacaagccgatcaaactgcaatctcgtgacgagttaatgtca
tgctgtttaaggtgtatagtctggctaaaagaaaatcttatcgccgcacttgtggatgac
acagaggggaattatgttctctttttgagtctttctgaggaaaacagcaaagtttgttta
aatattagttctaaactgcgagtgactgaaaacctcattatgttgtttcgaagtgaagat
tctcaacaatgccttttagcacaagattggcgagggcacatcttaagaataaatcaagag
tcatacactgtcaccgattgctcgcttccacaaggttgctctcgtgtagcgtgcacaaaa
tttaatggcgaagatatagcttttggtttgacaaagcatcatcgtttgttcatgaataaa
aaagagatagctagcaattgtacatcgtttttattgcacgaggagtttcttttgctaaca
acacatagtcacacattgaggagtgtttaccttaattcacttgcgaaagtcacaaagctg
gatgatgaatgcacgtattgtgttgatgaagctgttcgacgtgttgagagaggttcaaaa
cttgtcactgccgtacatcaaggaacagcagtcgtgttgcagatgccacgtggtaatttg
gaatgtattcatccacgtgcattagttgttagttgcctgcagaagttattaaacaatttg
aattatgagaaagcgtttgaagtgatgagacggaatcgaattaatttgaatctaatctat
gatcacaaccccaagctttttctggaaaacgtgaataagtttatcaaagacattcctacc
ataaattacttgaatttgtttttagctgacttaacgcccgaagatgtgtgctccacgtta
tattttcctttctatcaacatggagaagttgcaactgatgctaatcgaaaaaagacttct
tccaccaaagtagacatagtttgtcaggctgtaagagatgctattgagcggtctggtaat
gagaaatattttctcgcattattaacaacctatgcaaaacagtcatcacccgatctagaa
atggtattaatgaaaataaaacacttaaaagatcatccatcaaacgaaaacaacagtgtc
tcttatgataaggcgttaaattacattttatatctcatcgatgtaaatcaactgtttgat
atagcccttggtctgtatgatttcaagattgttttgatggtggcagagagatcccaaaag
gatccaaaagaataccttccttttttaaataactttcgcaacatggaaacaaattatcag
cactactcaatcgataaatatttgaagaagtatcagaaagcattagtttcacttgttaaa
tgtgaagactgttttaacgagtgcttggagttcgttaaagagcaaaaattgcatcgtcag
gctttaaagttgtttccagtcacgtctgaacaatacaggaaactaagtcttcaatatggt
gaatatttgcgacagcaaaaactacacgaagatgcaggcatagttctcagtcggagtgga
caccatcgagaagcactagaagcattcttacaaacgaataactggagtatggtgttaact
gaagcgaaagaactcgcttacccgaacgatcaaatcattaaattgtgcagagagttaagc
gaaaaattgaaatcaaaccgtctgtacgacgaagcagcatttctacttgaagtttacgta
caggatgtggaagaatgtgtagtatgtttcctggatggtggactgtggtttaaggcgttg
caactgattaaaaaacatgagcgcgatgacttgattgaaacgaatttgaagccctcgatt
cacaaccattacgagcagacagttgaaaagcttgaagatttacaggctaaatttaaaact
tacgaaagtcgattaaaagttgtggttgaaaagaaagcacgtgaaaacatggagattctt
gaaggcgttcgcgatgaccctgataatgatttatattcagacattagcagtatcactggt
caatccgtaaccactgcaagttcaaaaggatctcgaagttcaggacattcgaggaagagt
cgtagcaaagtagcacgcaaaaagtatagcctgcgagaggggagtaaacacgaagacttc
gcactgcgtgaagcattggctgaaattgtgagaacgtctgatcaaatgaaagaagaagtt
tcagcgctattgaaagctctggtattataccacttcgaagagaaagcttccaatttgcaa
aatttattaaacgaactacttcaacttatcgagactaaaattaaagagatctggaacaac
gagtcgacttcaaatgatgctgtgtctacgtatggtccggaagcgacggtgcagtcgatc
ctagcgcaaagacataatgtgcccgccatagaaaaagaccaacttcctccagctacacgt
cctgttgtgagagatataaattggaaactacatcttctacgtatctaa
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