Hydractinia symbiolongicarpus: 130635726
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Entry
130635726 CDS
T09218
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsy03009
]
130635726
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130635726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_GCN1
ARM_ECM29_C
Motif
Other DBs
NCBI-GeneID:
130635726
NCBI-ProteinID:
XP_057301160
LinkDB
All DBs
Position
3:complement(11742833..11771999)
Genome browser
AA seq
2666 aa
AA seq
DB search
MKKGKKKHNTFKFKNFTERISDVKIDVYQHLGVQTHEVPENDKDTFFRETLEKWSELNCS
LDFTAFYREVKGFVQSFNQLVFHKEAVIELLKKYLINPESLAVEPSLDLLAQLSRDLLQD
FYPYFEEFFYLLLNFLKGQDTALIENTFTCLAHIFKFTWRYMITDLPNVFRIFKCLFSSD
QKQHIQIFAAESFAFLLRKSRNKSQVFDFLFQQLSDDESLAEGIGFLIFHTTKGIKQQFS
SSAKEIFTLSLLSFTKESIKKKQALTAVKSLLRLSLQHTTEEFCGVVFDSIYKAIDDEVN
KENSLALSYYALVLNECVKFKDGKYIAAQDKIYKVMLALMSSGDFSEEITEISISKLLTS
FIHYSTSDISDKDLTALCYTYVFKDQISVSIKLQFCYSIFTWVKFNEIVLGTVLEYVSKI
LLSKDENEHSLAEQKVIAIQFIADFVSQDKSLFTQPFKFSNTDLIVFHQVCYTKKTVVDI
LIDELSTESLDSNVEWIGVIAICLCHSRLSHKEVRRLNPILVKIVNCGFDTKSNLSDQQL
FTLAYVIKVLCKVVSDKNEICRAIPVKKMINFLRKYPQNENVLQCAELYCSTVKNSFIQD
NLSTIHDILKTNLYSPFRLVRLLTLMILKHISDNIEGYGRVISETLQICTDAELVDVRLD
TYRDRLIYLRQLQFNNSEGNQFLYEVALRYLVGNLFINFSIIWDHVIEVISSHAVDGNIA
FWDIWREILQDAAQKCEFPPKLILNIPCSNKTFEKYFNLMWTSRKNERPDFLNFRILVWK
AMCSFPGVAERKSRDIVPLFFNFMTNEYVLSDEILSETQDIRVEEDMLLKVAEEENQVTN
EVHKLKGFRKMKLKSLCAHLKLFGLFKDPKSISKEKRLFQIYLDLLTNKDNEVQTLALNC
FHTYKFPYLKPYSENLDKLMNDSTFRDELTLFSSNSELLQQEHREKLMPILIRLLYGKLQ
RKTGLGNSGKSSLSTRRNIIMQFLSNCADTEIKTFIDLIMKPFLNRQELTITDKDASIDL
SSIVPMRKQTGFLNMLSNVISRLTKIISPYFHVLFSTLLKLIWECSMCLKDKKDMIKPSV
IGRLKDTRHLGIMKLVEIFNLLPEFDYQHYIEEIFAAAVWPQLNQMVSDSVQNATPLFHL
VITWSKNNRFHPLLCKVNDKGMSLVGCVYEMIKQPSLSNEMEKEIMLISSNLLKASNFDE
TGMNGTKIETESSFTEKERLGIKIIKPYVSELLKYLSNALLTNTKRFNFRSKQKIGRIVP
PIQLAVLSSISEFVTDTGQCNVLIKILFPLLQYIDGEDTQLHIVTTIKNLLPFVESTEEY
LQLIPCLFSVFSARVPREVLCQVYVGMSKNNAEISKVAALVNDLNAWDPKRLDEPDYDRR
LQAFRNINACVESNSWSCKQVLPIMFNTLHFMITTDDLSLRDASSSCIEKLLHLVVQNMD
DMFNEVVMKTLLPAIKLGLKSKKQATRLEFINLLSLVVKTFDKDSFNDMKFLSSNDPETD
FFENIKHIQVHRRIRALHQLSKLCEDQKLSVSNMFSFLIPMISHVIFDSLATTKDHNLLS
ETITTIGSIVKCLPWAKYSHILKNYLKVMRKDKRNQKTIIRVIVVILNNFNFDLSCLKAD
GDQVKAVMLQPAVEKTTEKKIEEESGEYDDDNDEDEDDVDVEWENETINKGIDRQSAAID
VEAAQRIHNALLSKIFPQLQFFLKKKSRIADFHKMSHNKEEDEEEIMKVPMALAMVKLLQ
HLPKATLHVHLPGLLLRVSQALRSHARDVRDMARDTLKRICQSLSAAYFPMVVKEMRSVL
LRGYQLHILGYTLHSLLESMHDMLVTGDLDNCVEAMMEVVIEELYGEVSEEKNVAGITGK
LMEARSHKSNESLEIIAKFVSSGCIGKVITPLKGVLESTQNHKTSRKVEESLRRVALGLQ
NNKGVQVEDLLVFIHGIISNTLPQMLNKKEDGDHSDRKEGEYVREDIYLVPEIPTRGGKL
PGVSKITNEHVVMEFGLQLLHTGLKRQKFSRSDDTHVKMLDPFVRILLSSITSKYIKVII
LTMRCISFLIKFPLPSMKESAPILARQLFKILKKYAKAGAGKGENFDLVMTSFKTMTVLI
RDYEDMHVTNKQLHLLLSFVEEDIYDTSRQSTALPLLKAILSRKLVVPEMHEVMAKIAEL
SVRDSDDVTRTQCRQLMLQYMLDYPLGKKIVHYLNFYVTHLSYEDLVGRLSTLEMLSSIV
KNFPERMILEYAGYFFIPLVMMLVNDDSTVCRKMAAGVVRLLIQNSDSKIKDQLFDMVVT
WSQQEKILLKQVSLQIAGMFVEAEGQSFQRRIDSILPVITSALQTGVEDDNNDEDDEEED
GQDAVGNNKSADKLLHNALTCLGKIFMLPELLMTNSEYSTSLICLWELIQDLLLHSHVWI
RLAASQLYSLYFASSTPNELVDSSESLSKQYLAVDLKTKVKELCSNFFTQMKDIKLTPAI
AEQATKNLIYLVKVVKLIDPYLLDGTQQNDNRGEDEEEDDDGKVITVKTLVTRMNQLASY
ESSHSPKQTVKRTCVFRWIAALCLDLHEEQLLIYLPDLLRPVHRELTTSINEDSDLFKLA
QEVIELIRGTVRKDLFAEVYAKLQKKVSEVKESRKRKIAMEAVSNPEKHVLRKQKHNLAK
REQRKRKLYEQKPSLMFKKIRSKPES
NT seq
8001 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggaaagaagaaacataacacgtttaagttcaaaaacttcactgaaaggata
tctgatgttaaaatagacgtgtaccaacatcttggtgtgcaaactcatgaggtacctgag
aatgacaaagacacattttttcgagaaacattggaaaagtggtctgaactgaattgttcc
ctagattttacagcattttaccgtgaagtgaaaggttttgtacaaagttttaatcagttg
gtgtttcataaagaagctgttattgaattgttaaaaaaatacctcattaatcctgagtca
cttgcagttgagccgagtttggacttgttggcacaattatcaagggatttattgcaagac
ttttatccatactttgaggagtttttttacttactgttaaacttcctaaagggacaagac
actgctttaattgaaaacacctttacttgtttggcacatatatttaaatttacatggcgt
tacatgattactgatcttccaaatgtattcagaatttttaaatgcctattttcaagtgat
caaaaacaacacattcaaatatttgctgcagaatcatttgcctttctactacgaaaatcc
cgaaacaaatcacaggtgtttgattttctttttcaacaactgtcagatgatgaaagtctg
gctgaaggaatagggtttcttatatttcacacaacaaaaggtattaagcagcaattcagt
tcaagtgcaaaagaaattttcacactgtccttgctgtcattcactaaagaatccattaaa
aaaaagcaggctttaactgctgtaaaaagtttactgcgcttatcactccaacacactaca
gaagagttctgcggagttgtgtttgattcgatatataaagctatcgatgacgaagtgaat
aaagaaaatagtcttgcactatcttactatgcgttggtgttaaatgaatgtgtgaagttt
aaagatggcaaatacattgcagcccaagacaaaatatacaaagttatgctggcattaatg
tcttcaggtgatttctcagaagaaattacggaaatatccatatcaaagttgttaacatcg
tttatacattattcaacttcagacatatcagacaaagacctaacagcattatgctatact
tatgtatttaaagatcaaatcagtgtatcaatcaaattacagttttgctactcgattttt
acatgggtcaaatttaatgaaattgttttaggcactgtgttagaatatgtgtccaagatt
ctactgtccaaggatgaaaatgagcattccttagcagaacaaaaagtaatagccatccaa
tttattgctgatttcgtcagccaagacaaaagtttatttacacagccatttaagtttagc
aacactgatttaattgtgtttcatcaagtttgttacacaaaaaaaaccgtagtggatata
ttgattgatgagctcagtactgaatcattggactcaaatgttgagtggattggagttatt
gctatatgtctttgtcattccaggttatcccacaaagaagtcagacgacttaatcctatc
cttgttaaaattgtaaattgtggatttgatacaaagagtaatttatctgatcaacagttg
tttacattggcatatgtaataaaagtattgtgtaaagttgtctctgacaagaatgaaata
tgtagagctattcctgttaaaaagatgatcaactttttgagaaaatacccacaaaacgaa
aacgtcttgcaatgtgctgagctatattgtagtacagtgaagaattcttttattcaagac
aacttatccacaatacatgacattttgaaaacaaatttatactctccatttcggttagtg
aggttattgacactgatgattttgaagcacatatctgataatattgaaggttatggcagg
gtcatatctgaaacgttgcaaatatgcaccgatgcagagttggtagatgttaggctagac
acatacagggatcgcttaatatacctgagacaacttcagttcaacaattcagagggcaac
caattcctctacgaagttgctttgagatatctagttggtaacttgtttataaacttcagt
ataatttgggatcatgtaattgaggtgatcagttctcatgcagttgatggaaatattgca
ttctgggatatttggagggagattttgcaggatgcagctcagaagtgtgaatttcctcca
aaacttattttgaacataccctgcagtaataaaacattcgaaaagtacttcaatttgatg
tggaccagtcgtaaaaatgaaagaccagattttttaaacttcagaatattagtgtggaaa
gcaatgtgttcatttcctggtgttgctgaaagaaagtcccgagatattgttccactgttt
tttaacttcatgacaaacgaatatgtactgtctgacgaaattctgtctgaaactcaggac
attagagtggaagaggacatgttacttaaagttgctgaagaagaaaaccaggtgacgaat
gaagttcataaattgaaaggatttcgcaaaatgaaattaaaatctttatgtgctcattta
aagctttttggcttgtttaaagatcctaaatcaataagcaaagagaagagacttttccag
atttatttagatttattaacaaataaagacaacgaggtacaaaccttagccttaaattgc
tttcatacatacaaatttccatacctgaagccctactcggaaaatttggataagctcatg
aatgattcaacatttcgggatgaattaactttattttcgagtaacagtgaattgttacaa
caggagcatagagaaaagttgatgccaattttaattaggttgttgtatggtaaactacaa
agaaaaactggacttggtaacagtggaaagtcttccctctcaactcgaagaaatattatt
atgcagtttttatcaaattgtgctgatacagaaataaaaacgtttatcgatttgattatg
aaacctttcttaaatagacaagaattgaccattacagataaagatgcttcaatcgattta
tcttctattgttccaatgcgtaaacaaactggatttcttaacatgctctcaaatgttatt
tctcgtcttaccaaaattatttcgccatactttcatgttttattcagcacgttactgaag
ctaatatgggaatgttcaatgtgcttaaaagacaaaaaagacatgataaagccctcagta
attggaaggctaaaagatacaaggcatcttggtataatgaaattggttgaaatatttaat
cttctgccagagttcgactaccaacactatattgaagaaatatttgctgcagctgtctgg
ccccagttgaatcaaatggttagtgattctgtacaaaatgcaacgccactttttcacttg
gtaataacttggagtaaaaataatcgttttcatccactactgtgcaaagttaatgataaa
ggaatgtcgctagttggttgtgtgtacgagatgataaaacaaccttcgctaagcaatgaa
atggaaaaggagattatgttgatttccagcaacttacttaaggccagtaattttgatgaa
actggaatgaatggaacaaaaattgaaactgaatcaagcttcactgaaaaggagagattg
ggtatcaaaatcatcaaaccttacgtatcagaattattaaaatatctcagtaatgctttg
ttaacaaacaccaaaagatttaactttcgatcgaagcaaaaaattggtcgcattgtacct
cctatacaattagctgtgttatctagcatcagcgagtttgtcactgatacaggacagtgc
aatgttttgataaaaatattatttccattgctgcagtacattgatggagaagatactcaa
ttgcatattgttaccacaatcaagaatctgctgccttttgttgaatcgactgaggaatat
ttgcaattaatcccttgcttgttttctgtgttttctgcacgtgttccgcgtgaggtatta
tgccaagtgtatgtgggtatgtcaaaaaacaatgcagaaatatcaaaagttgctgctttg
gtgaacgatttaaatgcatgggatccaaagagattggacgaacctgactatgacagaagg
ctacaagcttttcgaaatatcaatgcatgtgttgagtcaaattcctggtcgtgcaagcaa
gtcttaccaattatgtttaatacattgcactttatgatcaccacagacgacttgtcactt
cgagacgcctcatcaagttgcatagaaaaacttcttcatttggttgtacagaatatggat
gacatgtttaacgaagttgttatgaagactctgttgccagccatcaagctaggactgaaa
agcaaaaagcaggcgactcgcttggaattcatcaaccttttgtcattggttgttaaaaca
tttgataaagatagtttcaacgacatgaagtttttgtcttccaatgaccccgaaactgat
ttctttgaaaatataaaacatattcaggtgcaccgaagaatacgtgctttacatcagtta
tcgaaactctgtgaagaccaaaaactttctgtttcaaacatgttcagttttctcattccg
atgatcagtcatgttatattcgacagtttagcaacaactaaagatcacaatctactcagt
gagacaataacaacaataggctccattgtgaagtgcttaccatgggcaaaatattctcac
atattgaagaattacttgaaagtgatgaggaaggacaaacgtaatcaaaaaactataatc
agggttattgttgtcatccttaacaacttcaatttcgatttgtcgtgtcttaaagctgat
ggagatcaagtgaaagcagtcatgcttcaaccagcagtagaaaagaccactgagaaaaaa
attgaagaagaaagtggagaatatgatgatgataatgatgaggatgaggatgacgttgat
gttgagtgggaaaatgaaactattaacaaggggatagatagacaaagtgctgcaattgat
gtcgaagcagctcagcgtatacacaatgcactgttgtcgaagatattcccgcaacttcaa
ttctttttaaaaaagaagtctcgcattgctgattttcacaagatgagtcacaataaagaa
gaagatgaagaagaaattatgaaggttccaatggcgcttgcaatggtgaagctgctacaa
catttaccgaaagcaacactgcatgttcatttaccaggtttgctgttacgagtgtctcaa
gcacttcgaagccatgcgcgagatgtgagagacatggcacgagacacattaaaaagaatt
tgccaatcactgagcgctgcatactttccaatggtggtaaaagaaatgaggagtgttctt
ttgcgaggttatcagttgcatatactcggctatactcttcattcattgctggaatccatg
catgacatgttagtgactggtgatttggataattgtgtggaagccatgatggaggttgta
atcgaggagctttatggtgaggttagtgaagagaaaaatgttgctggtatcactggtaaa
ttaatggaagcgagatcgcacaagtcgaatgaaagtctagagattattgctaaatttgtt
tcaagtggctgcatagggaaggttatcacaccactaaaaggggtgcttgaatcaacacag
aatcacaaaacaagtcgaaaggtggaagaatctctgcgccgtgttgccttaggcttacaa
aataacaaaggtgttcaagtagaagacttgctagtatttatccatggaatcatctcgaac
actctcccacagatgctaaataaaaaggaagacggtgatcatagcgacaggaaggagggt
gaatacgttagagaagatatctaccttgtccctgagatacccacaagaggaggtaagctg
ccaggagtaagcaagataaccaatgaacacgttgtcatggagtttggactgcagctactt
catactggtcttaaacgacagaagttttcacgctctgatgatactcatgtaaaaatgctt
gatccgtttgtgagaatccttctgtcaagcattacatcaaagtatatcaaagttatcatt
ctcaccatgcgatgtatctccttcctgatcaaatttcctcttccatcgatgaaagaatct
gccccaatactagctcgacagttgtttaagattttgaagaaatacgccaaggcgggcgct
ggtaaaggggaaaattttgatcttgtgatgacatcattcaagacaatgacggttctcatt
cgtgactatgaagacatgcatgtaaccaacaaacagctacatttactgctctccttcgta
gaggaggacatatacgatacgtcgcgacaatcgacagcattacctttgctaaaagctatt
ctctcgcgcaaattagtcgttccagagatgcatgaggtgatggcgaagatagctgaatta
tctgttcgagacagtgatgatgtcactaggacgcaatgtagacagcttatgctacagtat
atgttggattatcctctgggaaagaaaattgtccactatttaaatttttatgtgacacat
ttaagttacgaggacttagttggaagattatcaaccttggaaatgctctcgtcaattgta
aaaaattttccagaacgtatgatcctcgaatatgctggttactttttcatccctcttgtt
atgatgttggtaaacgatgactcgacagtttgtcgtaagatggcggcaggagtagtgaga
ttgttaatacagaatagtgattcgaagatcaaagatcaactgtttgatatggttgttaca
tggtcccaacaagaaaagatcctactcaagcaggtatcgctgcaaatagctggcatgttc
gttgaagcagaaggtcaatcttttcaacgtcgtattgattcgattttacctgtgatcaca
tctgcactacaaactggcgtggaggatgataacaacgatgaagatgatgaggaggaggac
gggcaagacgctgtcggtaacaataaatccgccgataaactgcttcataatgctctcacc
tgtttggggaagatattcatgttaccagaattgttgatgacgaactcggagtattctacg
tcattgatctgtctttgggagttgattcaagacctcttactacattcacacgtatggatt
cgtctcgctgcctctcagttgtacagtttatatttcgcctcatctacaccaaatgaactg
gtagactcatctgaatcattgagtaaacaatatcttgctgtcgatttaaaaacaaaggta
aaagagctttgctccaacttctttacacaaatgaaagatatcaagttaactccagcaata
gcagaacaagccactaaaaatttgatttatctcgtcaaagtggtaaaactgattgacccg
tatttgctggatggtacacagcaaaatgacaatcgtggcgaagatgaagaagaagatgat
gatgggaaagttatcactgtcaaaactttagtaacgagaatgaatcaactggcaagctat
gaatcctcacactcacccaaacaaactgtgaagagaacatgtgtatttcgttggatagct
gctttgtgtttggacttgcacgaagagcagttgttgatatacttgccagatttattaaga
cctgttcaccgtgaacttaccacctctatcaacgaagattctgacttgttcaaattagca
caagaagtgatagagctgattcgtggcacggttcgtaaagatcttttcgctgaagtgtat
gccaagttacaaaagaaagtttcagaagtgaaggaatcaagaaaaagaaagattgcaatg
gaagctgtgtcgaatcccgagaaacatgttttacgtaaacaaaaacacaatctggctaag
cgagaacaacgtaaaagaaaactgtacgagcaaaaaccgtcgttgatgtttaaaaaaatc
agaagtaaacccgaatcgtga
DBGET
integrated database retrieval system
