Hydractinia symbiolongicarpus: 130635732
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Entry
130635732 CDS
T09218
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130635732
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsy01002
]
130635732
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130635732
03036 Chromosome and associated proteins [BR:
hsy03036
]
130635732
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130635732
Peptidases and inhibitors [BR:
hsy01002
]
Metallo peptidases
Family M67
130635732
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130635732
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
130635732
BRISC complex
130635732
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
130635732
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
130635732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
130635732
NCBI-ProteinID:
XP_057301167
LinkDB
All DBs
Position
3:complement(11727029..11732137)
Genome browser
AA seq
268 aa
AA seq
DB search
MVKRVLIESDALEVCMVHALSTEKEEVMGLLIGEVEDNISHIHAVIMLRRLDKRKDRVEI
SPEQLSSASSEAEDIGYKTRAQKSLRIIGWYHSHPHITVWPSHVDVRTQAMYQLMDKDFV
GLIISCFNDNTAHLGQMQVTCFQSIDVSSTHPPRYERLEIPQEIIPCNTISGACLQSLSS
LPQILYQEEYDSYNKSLRHDDQDLLTAVQNASVFSKSIIRIIEMICSPILQILENNLQMK
KKKMEELKSRHECLEKQLANILGEQEKR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaagagtacttatcgaatcagatgctctggaagtttgtatggttcatgcattg
tcaacagaaaaggaagaagtaatgggattactcattggagaggtagaagataatatctca
cacatacatgctgttataatgctacgtaggcttgataaaagaaaagatagggtggaaatt
tcacctgaacaactttcaagtgcatccagtgaagctgaagatataggatataaaactcga
gcccaaaagtcattacgaataattggatggtatcattcacatccacacattactgtatgg
ccttctcatgttgatgtgcgtacacaggccatgtatcaattgatggataaagattttgtg
ggtttaatcatctcctgttttaatgataatactgcgcaccttggtcagatgcaagtgaca
tgtttccaatcaattgatgtttcttcaactcatccacccagatatgagagactggagatt
ccacaagaaattataccttgtaacactatcagtggtgcatgcttgcaatccttatccagt
ttaccacaaattctctatcaggaggaatatgattcttacaacaaatcgctaagacatgac
gaccaagacttgctcacggctgttcaaaatgcttctgtattttccaaatcaataattcga
attatcgagatgatatgttcgccgattttacaaattttggaaaataatttacaaatgaaa
aagaaaaagatggaagaattaaaaagtcgccatgagtgtctagaaaagcaactggcgaat
attttgggcgagcaggaaaaacgttga
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