Hydractinia symbiolongicarpus: 130635891
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Entry
130635891 CDS
T09218
Name
(RefSeq) integrin beta-PS-like
KO
K05719
integrin beta 1
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04145
Phagosome
hsy04512
ECM-receptor interaction
hsy04820
Cytoskeleton in muscle cells
hsy05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
130635891
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130635891
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130635891
09142 Cell motility
04820 Cytoskeleton in muscle cells
130635891
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130635891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130635891
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsy04147
]
130635891
04515 Cell adhesion molecules [BR:
hsy04515
]
130635891
04090 CD molecules [BR:
hsy04090
]
130635891
Membrane trafficking [BR:
hsy04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130635891
Exosome [BR:
hsy04147
]
Exosomal proteins
Proteins found in most exosomes
130635891
Cell adhesion molecules [BR:
hsy04515
]
Integrins
Integrin beta subunits
130635891
CD molecules [BR:
hsy04090
]
Proteins
130635891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
vWA_SIBA-E
EGF_2
I-EGF_1
EGF_Teneurin
DUF2371
DUF1131
Motif
Other DBs
NCBI-GeneID:
130635891
NCBI-ProteinID:
XP_057301399
LinkDB
All DBs
Position
3:14331874..14421536
Genome browser
AA seq
790 aa
AA seq
DB search
MQLFQFFIICVLLIGCINIAVGTSGYDCNSKQNCSDCIAFSPKCSWCEDIYYNITEKTFY
KKCDLVETHQRQKCSKINNPPSKSTIDKAAPLVDETRVSPQEITVKLRPGQPTKVDVKVK
TPKNFPIDLYYLMDLSKSMKDDLKQIRDLGTLLSNEMKDVTSNFRLGFGGYVDKPLGPYT
KTNPEEIKSLDPNVQQTFGYKNYLPLDDDPKKFGQTINNVAISYNVDVPEGSLEALMQVI
VCKGIGWREKKKARRIVIITTDATFHYSGDGLLGGVVIPNDGKCHLVNDTTYDAWDKFDY
PSLSQIRSVMIENQIVPIFATTGNNKLYEKVASFFGNGSGAVADALYANSSNVVPLIKEA
YRKIAKTVSIKAITSEGIEVKFEAKCGKNDELKQSAFCNNVQIGEEVTFVAEFLALDCRH
AGKNKRFKLETPFDDVIVNLELLCECNCSNTDVNSDDCMSRGDLSCGMCFCDKDKYAGRF
CQCTAEEARNQTRCKVPGSSKICNDQGRCVCGECVCYTGQLNKYKEIEYIDGNQCQCSNT
TCKRSNGSQVCGGPDHGTCICGECDCTQDWQGESCADRCPRGKDNCIDDLGVECSNKGSC
KCNQCQCKKGYIGDFCQECATNCPDPCQDYRECVKCRVFDTSDLSSAECEAECLRRNITS
HIVVEKVPEDRRRCIARDEDECSFVFTYNKDNVTDTIQLVVQKDRICPAEPDILAIILGV
IAGIVGIGLALLLIWKLLATIQDRREFAQFEKDRQNPKWDSGENPIYQKATSTFQNPMYG
NKPEEMEPLT
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcaattatttcaatttttcattatttgtgtgctgctgataggatgtataaatattgca
gttggtacctcaggatatgattgcaattctaaacaaaattgcagtgactgcatagcattc
agtccaaaatgttcatggtgtgaagatatttattacaacataactgaaaaaacgttctac
aagaaatgtgatttagtggaaacacatcaacgtcaaaagtgttccaagataaataatcca
ccttctaaatctacgatagataaagctgcaccactagtggatgaaaccagagtatcaccg
caagaaataactgtgaaacttaggccaggacaaccaacaaaggttgatgtcaaagtaaag
acaccaaagaattttccaattgatttatactacctgatggacttgtcgaaatctatgaag
gatgatttgaaacaaattcgtgatctgggaacattgttgtcaaatgaaatgaaagacgta
acgtcaaacttccgacttggttttggtggatatgtagacaagccgttaggaccatacact
aaaactaatccagaagaaatcaaaagtttagatcctaatgttcaacaaacatttggttat
aaaaactacttacctttggatgatgacccaaaaaaatttggacaaacaatcaataatgtt
gcaatatcgtacaatgtagatgtgcctgaaggttctcttgaagctctgatgcaggtcatt
gtgtgtaaaggcattggatggcgtgaaaagaaaaaggcaagaagaattgttatcattacc
actgatgcaacttttcattattctggtgatgggctattaggtggagttgtcatccccaat
gatggcaaatgtcatcttgtcaatgatacgacttatgatgcatgggataagtttgattat
ccatcattgtcacagattcgctctgtcatgatagaaaatcaaattgtaccaatctttgcc
acaactggcaacaacaagttgtatgagaaagttgcatcattttttggaaatggatctggg
gcagttgcagatgcgctatatgcaaattcatcaaatgttgtaccactaattaaagaagca
tacagaaaaattgccaaaactgttagcataaaagctattacatcagagggaattgaagtt
aaatttgaggcaaaatgcggtaaaaacgatgaattaaagcaatctgcattttgtaacaat
gtacaaatcggagaagaggtgacgtttgtggctgaatttcttgctcttgattgcagacac
gctgggaagaataaaagatttaagcttgaaactccatttgatgatgttattgtaaactta
gaattactatgtgaatgcaactgcagtaacaccgatgttaatagtgatgattgtatgtcc
agaggtgacttgtcatgtggaatgtgcttctgtgacaaagataaatatgccggccgattt
tgccaatgtacggcagaagaggcgaggaatcaaactcgttgcaaggttccaggatcaagt
aagatttgcaatgatcagggtagatgtgtgtgtggagaatgtgtgtgctacacaggacag
cttaacaaatacaaagagattgagtacatcgatggtaatcaatgtcaatgcagtaacact
acttgcaaacgttcaaatggttctcaagtatgcggtggaccggaccatggtacatgtata
tgtggcgagtgtgattgcacgcaggattggcagggagaaagctgtgctgacaggtgccca
agaggaaaagacaattgcattgatgatttaggagttgaatgcagcaacaaaggatcatgc
aaatgcaatcaatgccaatgcaaaaaaggttacattggagatttttgtcaggaatgtgct
actaactgtcctgatccctgtcaagattatcgagagtgcgtcaaatgtcgtgtatttgac
acgagtgacttgtcatctgccgaatgtgaagcggaatgtctacggaggaacatcaccagt
cacattgtcgtagaaaaggttcctgaagaccgtcgtcgttgcattgcccgtgatgaagac
gagtgttcatttgtattcacctacaacaaagataatgttactgataccattcaacttgta
gttcaaaaagacagaatctgtccagcagagccagatattttggccattatcctaggtgtg
attgctggtattgtaggaattggtttagctctgttgttaatttggaaattacttgcaacg
atacaggatcgaagagagtttgcacaatttgagaaagatagacagaatccaaaatgggac
tcgggtgagaatccaatctaccagaaagcgacttcaactttccaaaatccaatgtatggt
aacaaaccagaggaaatggaaccattaacatag
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