Hydractinia symbiolongicarpus: 130635952
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Entry
130635952 CDS
T09218
Name
(RefSeq) cullin-4A-like
KO
K10609
cullin 4
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03420
Nucleotide excision repair
hsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130635952
09124 Replication and repair
03420 Nucleotide excision repair
130635952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130635952
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130635952
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsy04147
]
130635952
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
130635952
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
130635952
TCR (transcription coupled repair) factors
Cul4-CSA complex
130635952
Exosome [BR:
hsy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130635952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
130635952
NCBI-ProteinID:
XP_057301479
LinkDB
All DBs
Position
3:16112154..16127715
Genome browser
AA seq
808 aa
AA seq
DB search
MKKLKVLTEHNEQLNTSQKKRKLNENDEVYDDNTVEGENSSCKKTRMECEPSSHGKNGFS
QNHKKNILGFGGNNHLQGKTGSFTSGKQSPSKKLIIKNFKAKPVLPDNYKESTWEKLKDA
VDAIHTSRSISSSLEELYKAVENLCSHDMSMLLYNQLKQVCEEHVKKTIQEFTGSGMDNF
IFLKKMNSLWDSHCRQTTMIRSIFLYLDRVYVLQTSAILSIWDVGLQLWRTHIMGNSTVQ
TKAVDGLLFLIEKERNGEAVDRILLKNLIRMLADLQMYHDVFEPKFLQATDLLYAAEGQK
FMIEVDVPNYLLRVEKRLTEESERLLQYLEPGTRKPLITCVENQLINSHLSNILSKGFDY
LMDLNSVTHLALMYQLFARVKTGLENLCEYFGAHVKVRGLTIVEDTEKDKVMVQELLDFK
EKLDNLIKEAFNDNQRFVIAMKDAFEHFINKRQNKPAELIAKFIDGKLKTGNKESTEDEL
ERRLDKIMILFRFIHGKDVFEAFYKKDLAKRLLLGKSASVDAEKSMLSKLKQECGSAFTS
KLEGMFKDMELSKDIMTSYKQHIHNQPINIDLNVNILTMGYWPTYTPMDVHIPTEMVKLQ
ENFKTFYLSKHSGRKLQWQTTLGSCNVKTRFPSGIHELQVSLFQTLCLLQFQDCDEFSYD
ELKTATGIEEGELKRTLQSLACGKVRVLKKTPSGKDVNSTDKFVFNLQFTHRLCKIKINQ
VQMRETFEENQLTNEQVFQDRQYQIDAAIVRILKTRKTLAHNLLVNELYNQLKFPVKPSD
IKKRIESLIDRDYMERDKDNPNTYNYVA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattaaaagttctaacagaacataatgaacaactgaacactagtcagaaaaaa
cggaaattgaatgagaatgatgaagtttatgatgacaatactgtagaaggggagaattca
agctgtaaaaaaacaagaatggagtgtgagccttcgtcacatggaaagaacggttttagt
caaaaccacaagaagaacattcttggattcggaggcaataaccatttgcaaggaaaaact
gggagttttacttctggtaaacaatctccatcaaaaaaattaataataaaaaactttaaa
gcaaaacccgttcttccagacaactacaaggaatcaacatgggagaaactcaaagatgcg
gttgatgcaattcacacaagtcgatcaatatcttcaagtttagaagaattgtataaagct
gttgaaaacttatgctctcatgacatgtctatgttattgtataatcagctgaagcaagtt
tgcgaagaacatgtaaaaaagacaattcaagaatttactggtagtgggatggataatttt
atatttttaaagaaaatgaattccctttgggattctcattgcagacaaactactatgatt
cgtagcatcttcttatatctggatcgtgtttatgtgttgcagacatctgcaattttgtca
atatgggatgttggacttcagttatggagaacgcacattatgggaaattctactgtccaa
acgaaagcagttgatggactgttatttttaattgagaaagaaagaaatggtgaagccgtt
gatagaattcttttaaagaacttaatacgtatgctggcagaccttcagatgtatcatgat
gtatttgaaccaaagtttttacaagcaacagatttgttatatgctgcagaaggtcaaaag
tttatgatcgaagtcgatgtcccaaattatttattacgagtagagaaacggttgacagaa
gaatcagaacgtttacttcaatatcttgagccaggaacgagaaaacctctgatcacttgc
gttgaaaaccaacttattaacagtcatttgtcaaatatattaagcaaaggctttgactat
cttatggatttaaattcagttacacaccttgctttaatgtatcagctctttgcacgtgtt
aagacaggtttagaaaacctttgtgaatactttggagctcatgtaaaggtaagagggtta
acaatagtagaagatacagaaaaggataaagtcatggttcaagaactcttagactttaaa
gagaaactggataacttaatcaaggaagcattcaatgacaatcaaagatttgttattgct
atgaaggacgcgtttgaacattttataaacaaaaggcaaaataaaccagcagaattaata
gctaaatttattgatggaaaattaaaaactggaaataaggaatcaactgaagatgagttg
gaaagaagattagacaagatcatgattctattccgatttatccatggcaaagatgtattt
gaagccttttataaaaaggatctcgcaaaacgtctgttgcttggcaagagtgcatctgtt
gacgctgaaaaatctatgctgtcaaaattaaagcaagaatgtggaagtgcttttaccagc
aaattggaaggaatgtttaaagatatggagctgtcaaaggacatcatgacgagctataaa
cagcacattcacaatcaaccaataaacattgatttaaatgttaacatcttaacaatggga
tactggcctacgtacactccaatggatgtacatatccccaccgaaatggtgaagttgcag
gaaaatttcaaaacattttatctcagtaagcatagtggaagaaaactgcaatggcaaacc
actttaggtagctgcaatgtgaaaacaagattcccttcgggtatacacgaactgcaagtg
tcactttttcaaacgctttgtttgttgcaatttcaagattgtgacgaattctcgtacgat
gaactaaaaacggctacgggtatagaggaaggagaattgaaaagaactttgcaatcattg
gcatgtggtaaagtaagagtgttgaaaaaaacaccttcaggcaaggatgtgaattcaaca
gataaatttgttttcaatttacaatttacccatcggctgtgcaaaattaaaattaatcaa
gtacagatgagagagacgtttgaagaaaatcaacttacaaacgagcaagtttttcaagat
cgacagtaccagattgatgctgccatagtgcgtattttaaaaacaagaaagacgcttgct
cataatttactggtcaatgaattgtacaaccaactgaaatttccagtcaagccttccgat
ataaagaagaggatagaaagtttgattgatagagactacatggaaagagacaaggataat
ccaaacacatataattatgttgcataa
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