Hydractinia symbiolongicarpus: 130635995
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Entry
130635995 CDS
T09218
Name
(RefSeq) RNA-binding protein FXR1-like
KO
K15516
fragile X mental retardation protein
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130635995
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130635995
Factors involved in mRNA localization
Other mRNA localization factors
130635995
mRNA cycle factors
Stress granule specific factors
130635995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
KH_1
Agenet
Tudor_FRX1
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
130635995
NCBI-ProteinID:
XP_057301545
LinkDB
All DBs
Position
3:16680799..16690912
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AA seq
803 aa
AA seq
DB search
MEEIQVEVRNRQNGAFFPAEIKNIHSEEATVEFYHSPNKWIRVPLSEIRKPLPLSQEALK
FNDGDDIEIYAKEDDGEPMGWWEGKVVSRRGGFFVVRFNGLDDAFNEIVPLERIRPLGQW
QPVSRGMYFKCMIDVPQDLRTICGTDVHGTFCQQTQASSVFYHGDLNVLVILSVREDSIK
KAAILSEMHFRSLRTKLLLRSRNEEAVKQLDIAKKQAQQAPVFEQLTLPEDLVGLAIGAQ
GANIQAARRIPGVLSVEVDEAACTFNILGENVECVKEARCLLDFAEEQVYVPRAYVGKVI
GRNGRIVQDIVDKSGVVRVKIDPEPEENKSEEEKKKDVPFLFIGTRDNICNAKMMLEYHL
SHLKDVEELRSQKDNIDLELRIYGVNPSTGPFFPPPAEMRRQHALSITSQYDGIVRDRTQ
TIESYAGDLAELPVYTSNPSNRNPLFGLRVRTNSETEPLKKDDKTGRTSPLGKSHSPDGI
PQTIHEADSEYSQEIKPTGSQTSSRGRANSKRGSFHGNRSTHGRQRVNSESEREKSEANE
NLDWRRRDEAAEVKDESLEYQQRRRTKSEGESLPEPKQIQIKQRSATNAGHQKAPPNSKQ
KNDHPKNNHHQKQNRDNAKSDERTTSTQHQNKNKNQNNRPNQPREHRKILRHANNPNKQQ
NRQIKGKEATDAKQNGNTQEAEQELTSEIKSSVTSDTGQVKSPAETAVAADEKPANPENP
GAAAPQHPAAAAPHHPAEKALEKKSCVDCKTKSVGVLKDNNKNEIVSESEKDLTSNGPLL
ELKNDVAVSTEKKDASVEISQQS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatacaagtggaagtgagaaacagacaaaacggtgcatttttccccgcggag
atcaaaaacatacacagtgaagaggcgactgtggaattttatcacagcccaaacaaatgg
ataagagtaccactatcagaaataaggaaaccccttcctttgtctcaagaagctttaaag
tttaatgatggtgatgatatagagatttatgcaaaggaagacgatggcgaaccaatgggc
tggtgggaaggaaaggttgtatccagacggggtggattttttgttgttcgctttaatggt
cttgatgatgcttttaatgaaattgtgcctttggaacgtattcgacctctgggacaatgg
cagcctgtttctcgtggaatgtattttaagtgtatgatagatgtaccgcaggatctacga
actatctgcggtactgatgtccatggcacattttgtcagcaaacacaagcttcgtctgtc
ttttaccatggcgatttaaatgttcttgttatattgtcagtcagagaggactcaataaaa
aaagcagccatattaagtgaaatgcattttcgaagtttgcgtaccaaattgctattgcga
tcacgcaatgaagaagctgtaaaacaactcgacattgctaaaaaacaggcacagcaagct
ccagtttttgaacagttgacacttccagaagacttagttggtttggctattggagcacaa
ggggccaatatccaagctgctcgtcgtataccaggagtgttgtctgtagaagtggatgaa
gcagcgtgcacatttaacatccttggggagaacgtggaatgtgtcaaagaagccagatgt
ttacttgattttgctgaagagcaagtctacgttcctagagcttacgttggtaaagttatt
ggtagaaatggacgaattgtgcaggacattgtcgataaatcaggggtggtaagggtaaag
attgaccctgagccagaagaaaataaatctgaagaagagaaaaagaaagatgtaccattt
ctgtttattggcaccagagataatatctgcaatgctaagatgatgttggaataccatttg
tctcatttaaaggacgtagaagagttaagaagtcagaaagacaatattgatctggaattg
cgtatatacggtgtgaatccctccacaggtccattcttcccaccacctgctgaaatgcgt
cgtcagcacgcattaagtattacgtcacaatacgatggtattgtacgggaccgaacacaa
acaattgagagctatgcaggtgatctagccgaactgcctgtttacaccagcaatccttca
aatcgaaatcctttgtttggtttgcgtgtaagaacaaatagtgagacagaacctcttaag
aaagatgataagactggtcgtacctctccgcttgggaaaagccattcaccagatggtatt
ccacagaccatacacgaagctgattcggaatactctcaggagattaaaccaactggtagt
cagacttcgtcacgtggtcgtgctaacagcaaacgtggatcgttccatggcaacagaagc
actcatggtagacaacgagttaacagtgaatctgaacgcgagaaaagtgaagcaaatgag
aatctcgactggcgtcgtcgtgacgaagcagcagaggtaaaagatgagtcgttggaatat
cagcaacgaaggagaactaaaagcgaaggagagtcgttaccagaaccaaaacagattcag
attaagcaacgttcggccacaaacgctgggcaccagaaagctcctccgaacagcaagcag
aagaacgatcaccccaaaaataatcaccatcaaaaacaaaaccgcgataacgcgaagtcg
gatgaaagaacgacgtccacgcagcatcaaaacaaaaacaagaatcaaaataaccgcccc
aaccaaccacgtgagcatcgtaagatccttcgtcatgccaataacccaaataaacaacag
aacagacagataaaggggaaggaagcgacggatgctaaacaaaatggaaacacgcaggaa
gcagaacaagaacttacctcggaaattaaatcgtccgttacttctgatactgggcaagta
aaatcacccgctgaaactgctgttgctgctgatgaaaaacccgctaaccctgaaaatcct
ggggcagcagcaccccaacatcctgcggcagcagcaccccatcatcctgcggagaaagca
cttgaaaagaagagctgtgtagattgcaaaacgaaatcggtaggtgtattgaaagataac
aataagaacgagattgtatccgaatctgagaaagacttgacgtcgaatggtcccttactg
gaacttaaaaatgacgtcgccgtctcgacggaaaaaaaagacgcgtctgttgaaatcagt
cagcagtcgtag
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