Hydractinia symbiolongicarpus: 130636017
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Entry
130636017 CDS
T09218
Name
(RefSeq) transcription factor SOX-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsy03000
]
130636017
Transcription factors [BR:
hsy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130636017
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
130636017
NCBI-ProteinID:
XP_057301576
LinkDB
All DBs
Position
3:complement(17002496..17005652)
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AA seq
416 aa
AA seq
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MTTTAEVISQTATATINVNHIKPDNNYPTHHILPMTMSATSLSPTMQTSNISHLMSQEAQ
SYAHDGDPSKLDDPERVKRPMNSFMVWSREKRRKLAQENPKMHNSEISKRLGAEWKVLTD
EEKAPFVYEAKRLRAEHMKSHPDYKYRPRRKTKSLSKKTENKIAMPTAVIGADGKQIFMS
AQYPYAIASGINYPVPFNGYMSALVNGHEAYHAGATMYGIPPGTAIAVASLPQSTTSSST
TSVTPVTAAQYSVVPGGTTYMYSPFSSFPYLNGATMSAYSAQAAAAAAYPHTVTVKHEAA
VTTTATDKPAEAQTVETAKATSTTTTATALPSHYYPIGGMYPTAVAVDQNSNITAYDPKT
QYASMALIGQAKRVEMQGTNPHPAVVITMPEQHSQSPARSMNTSVQQNSPVLAVSE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgacaactacagctgaagttatttcacaaacagcaactgcaactattaacgttaaccat
attaagcctgataataattatccaactcatcatattctcccaatgacaatgtctgcaact
tctcttagtcctactatgcaaacttccaacatttctcatctgatgtctcaagaggcgcaa
tcatatgcacatgacggtgatccttcgaaactggatgaccctgaacgggtaaaaagacca
atgaattcctttatggtatggtctcgtgaaaagagaagaaaattagctcaagaaaatcct
aaaatgcataacagtgaaataagtaagagacttggagctgaatggaaagttttaactgat
gaggaaaaagcaccctttgtctatgaggcaaaacgactaagggcagagcacatgaagtcc
catccagattacaagtatcgacccagacgcaagacaaagtcattgtctaagaaaacagaa
aataaaattgctatgcctactgctgtaattggtgcagatggtaaacaaatctttatgtca
gcacaatatccttatgcaattgccagtggtataaattatccggttccttttaacggttat
atgtcagccttagttaatggacatgaagcttatcatgctggtgctaccatgtatggtatt
ccacctggaacagcaatagcagttgcaagcttaccacaatcaactacttcatctagtaca
acatctgttacacctgtgactgctgcacaatatagtgttgttcctggtgggactacatat
atgtatagcccattttcgtcatttccttacttaaatggtgctacaatgagtgcctatagt
gctcaagcagcagctgcagcagcttacccacatacagtgactgtcaagcatgaggcagct
gttactaccacagcaacagataagccagcagaagcacaaactgttgaaacagcaaaagca
actagtacaactactacagcaactgcattaccaagtcattactatccaatcggtggaatg
tatcccacagcagttgctgttgatcagaatagcaatattacagcttatgatccaaaaacg
caatatgcctcaatggctctaatcggacaagcaaaaagagtggaaatgcaaggaacaaac
ccccatcctgcagttgttattacaatgcctgaacagcattcacagagtccagctcgaagc
atgaatacttctgtgcaacagaattcacctgttctggcagtgtctgagtga
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