Hydractinia symbiolongicarpus: 130636179
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Entry
130636179 CDS
T09218
Name
(RefSeq) replication factor C subunit 4-like isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03030
DNA replication
hsy03410
Base excision repair
hsy03420
Nucleotide excision repair
hsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130636179
03410 Base excision repair
130636179
03420 Nucleotide excision repair
130636179
03430 Mismatch repair
130636179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsy03032
]
130636179
03036 Chromosome and associated proteins [BR:
hsy03036
]
130636179
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130636179
DNA replication proteins [BR:
hsy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130636179
DNA Replication Termination Factors
ELG1-RFC complex
130636179
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130636179
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130636179
Check point factors
HRAD17(Rad24)-RFC complex
130636179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_11
AAA_16
Rad17
AAA_24
DNAX_ATPase_lid
AAA_assoc_2
AAA_30
AAA_22
SLFN-g3_helicase
DUF815
RuvB_N
AAA_19
Mg_chelatase
ResIII
ATPase_2
AAA_14
MCM
bpMoxR
AAA_7
AAA_5
Prok-TraM
AAA_2
AAA_23
AAA_28
UBA_HYPK
Motif
Other DBs
NCBI-GeneID:
130636179
NCBI-ProteinID:
XP_057301799
LinkDB
All DBs
Position
3:21268897..21395782
Genome browser
AA seq
419 aa
AA seq
DB search
MNLNCHNGYFYSHKFKKTLFFGFSYSERLARDWLLLMVHSRNANFIFIMELGRLNHITTK
AKYVVMMMDQFFKSKKAKLTSQEQRISKPIKNLPWVEKYRPRTVQDVAHQDEVVAVLQNT
VKGSDFPNLLFYGPPGTGKTSTILAVCRQLFGHDLYRSRVLELNASDERGIQVVRDKVKN
FATQAVSGQKQDGTPCPPFKIVILDEADSMTTHAQAALRRTMEKQTKTTRFCLICNYVSR
IIEPITSRLAKFRFKPLAIETIRGRLQMITKAEAVDIEEKAVEEVIKASEGDMRKAITYL
QSAHRLKLAETITTSDIIEMAGVIPEDVLKSLIETCYSGSFDKLDDEVKGMINEGYSASQ
AVNQLHDKLVILESISDNQKSVILEKFAVVDKCLCDGADEYLQIMAVCTVIMDQLCKSG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaactgtcacaatggctatttttatagccacaaatttaaaaaaacattattt
tttggtttctcttattctgaaagactagctagagattggcttttgttgatggttcactct
agaaatgccaatttcatttttattatggaattaggcagattaaaccatattactaccaag
gctaagtacgtagtgatgatgatggatcagttcttcaaatcaaagaaggcaaaacttaca
tcccaagagcaacgtatatcaaaaccaatcaaaaatctcccttgggtagaaaaatatcgt
ccaagaacagttcaagatgtggcacaccaagatgaagtggttgctgttttgcagaacact
gtgaaaggaagtgattttccaaatcttctgttttatggtcctcctggtactggaaagaca
tcaactatactagctgtatgtagacagttgtttggacatgatttatacagaagtcgtgtt
cttgaactaaatgcatctgatgagcgtggtatccaggttgtgcgagataaagtaaaaaat
tttgcaacccaagccgtttcaggacagaaacaggatggcacaccatgtccaccttttaag
attgtcatattggatgaagctgactctatgacaactcatgctcaggcagcattgaggcgc
actatggaaaaacaaacaaaaacaacaagattttgtctcatatgcaattatgttagcaga
attattgaaccaatcacatcacgtttggcaaaatttcgattcaagccattggctatagaa
actatacgtggaaggttacaaatgattaccaaagcagaagcagttgatatcgaggaaaag
gcagttgaagaggtcattaaagcatctgaaggcgacatgagaaaagccattacctacctt
caaagtgctcatcgactgaagcttgcagaaaccataactactagtgacatcattgaaatg
gcaggcgtaattccggaagatgtactaaaatcactcattgagacgtgttattctggttcg
tttgacaagctagatgacgaagtcaagggaatgataaatgaagggtactctgcaagtcag
gctgtaaaccagttgcatgataaactagttatactggaatcaattagcgataatcagaaa
tctgttattctagaaaagtttgcagtggtggataaatgcctctgcgatggagccgacgag
tacttacaaataatggcagtttgtactgtcatcatggatcagctgtgtaaaagcggttaa
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