Hydractinia symbiolongicarpus: 130636256
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Entry
130636256 CDS
T09218
Name
(RefSeq) ATP-dependent RNA helicase DDX3Y-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130636256
03041 Spliceosome [BR:
hsy03041
]
130636256
03036 Chromosome and associated proteins [BR:
hsy03036
]
130636256
Enzymes [BR:
hsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130636256
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130636256
mRNA cycle factors
Common to processing body (P body) and stress granule
130636256
Spliceosome [BR:
hsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130636256
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130636256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130636256
NCBI-ProteinID:
XP_057301899
LinkDB
All DBs
Position
3:complement(22691659..22703659)
Genome browser
AA seq
691 aa
AA seq
DB search
MSHVVQNDVHGLGQRVASLDLNKQGQQGDSKYVPPHLRGKQGFAGPAYFEGPQGGGPPQR
DFNRGYQGGYNQGGYNNYRGGGGGGGGYNNYRGGGGGGGYNNYRGGGGYNNYNQGYQNNY
NRRGGNQGNFSWHSERGARWESGDYNNTPEDWSTPGPRNERLESELFTSVQSGINFDKYE
DIPVEATGSNAPNGIETFEEANLGEIITKNIELAQYSKPTPVQKHSIPIVKAKRDLMACA
QTGSGKTAAFLVPILSRIYEEGPFEGASNNRSGGRRKQFPIALVLAPTRELASQIYDEAR
KFVYRSCIRPCVVYGGADVGTQMKDIDRGCHIIVATPGRLVDMVQRGKIGLECIRFLCLD
EADRMLDMGFEPQIREIVEKNDMPPTGTRQTLMFSATFPKEIQMLARDFLDNYIFLAVGR
VGSTSENITQKVVWVEEHDKREFLLDLLNASGPDSLTLVFVETKRGADALEDFLYRCPEQ
YRVSSIHGDRHQREREQALSSFRSGATPILVATAVAARGLDIPNVKHVINFDMPSDIEEY
VHRIGRTGRVGHTGLATSFYNDKNRNIARDLIDILSEAKQEVPSWLESMGYQAQQHQAAK
RAQKSRYGGGGFGGRDYRQSGGRGGGHHGGNNLYSQPPAMHYGGNPYGGFTHYNPPMMQQ
QSGYRGGGGGGSRGGNRGGGGRNTTDDWWDK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtcgtacaaaatgatgttcatggtctagggcagcgagtggcttctctggac
ttgaacaagcaaggacaacaaggagatagtaaatacgtacctccgcatttaagaggaaaa
caaggctttgctgggccagcttacttcgaggggccacagggtggtggcccccctcaaaga
gattttaatcgtgggtatcaaggtggctataatcaaggtggctacaacaactatcgtggt
ggtggtggtggtggtggcggttacaacaattatcgtggtggtggcggaggtggcggttac
aataactatcgtggaggcggtggctataacaattataaccaaggctatcagaacaactac
aatcgacgaggtggcaatcaaggaaatttttcttggcattctgagcgaggagcaagatgg
gagagtggggattataacaacactcctgaagattggtcgacaccaggaccaaggaacgaa
aggctggaaagtgagctgtttacatccgtgcagtcaggtataaactttgacaagtatgaa
gacattccagtcgaagcgactggcagcaatgcaccaaatggtattgaaacttttgaagaa
gctaatttgggagaaattattacaaaaaatattgagcttgcgcaatattctaaacctaca
ccagtccaaaagcattctatcccaatagttaaggcaaagcgagatttaatggcttgtgcc
caaacaggttctggcaaaacagctgcatttttagttcctattttgagtcgtatctatgaa
gagggcccatttgaaggagctagtaataatcgatctggtggtagaagaaaacaattccca
attgcattggtcctggcaccaacacgtgaactagcttctcaaatctatgatgaagccaga
aaattcgtttaccgatcttgcattcgaccctgtgttgtttatgggggagctgatgttggt
acccagatgaaagacattgaccgtggttgtcacattattgtagcaacaccaggtcgacta
gttgacatggtgcaaaggggaaagataggtcttgagtgtattaggtttctttgtctggat
gaagctgatcgtatgttggacatgggtttcgagccacagatacgtgagattgtagaaaaa
aatgacatgccacccactggtacaagacagacacttatgtttagtgctacttttcccaag
gaaattcagatgttggctagagattttctggataattacatttttctggctgttggacga
gttggctcaaccagcgagaacattacccaaaaagtggtatgggtagaagaacatgataaa
agggaatttttgctcgatttattgaatgcttcaggacccgattcattaacactggtgttt
gtggagacgaagcgaggcgcggatgcattggaggacttcttgtatcgctgtccagagcaa
tatcgtgtaagctctattcatggtgacaggcatcagagggaaagagaacaagcactttcc
tcattcagatctggtgccacacccattttggttgcaactgctgttgctgcacgtggcttg
gacattccaaatgtaaagcacgtgattaactttgatatgccaagtgatattgaggagtat
gttcatcgcattggacgtactggccgtgttggccataccggacttgcaacatcattttac
aatgacaagaacagaaacattgcgcgtgatttaatcgatatcttatctgaagcaaaacag
gaagttccctcttggttagaatctatgggataccaagcccaacaacaccaagctgctaaa
cgagcccaaaaaagcagatatggtggtggcggcttcggtggtagagattacagacagtca
ggaggtcggggaggtggtcaccatggtggtaacaacttgtatagccaaccacctgcaatg
cattatggaggcaacccatatggtggctttacccactacaatccacccatgatgcaacag
caaagcggataccgtggtggtggtggtggtggtagtcgtggtggtaatcgtggtggaggc
ggccgcaataccactgacgactggtgggacaaataa
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