Hydractinia symbiolongicarpus: 130636375
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Entry
130636375 CDS
T09218
Name
(RefSeq) retinoblastoma-binding protein 5 homolog
KO
K14961
COMPASS component SWD1
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsy03036
]
130636375
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
130636375
COMPASS/SET1 complex (yeast)
130636375
MLL-HCF complex
130636375
MLL3/MLL4 complex
130636375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Frtz
Beta-prop_IFT122_1st
eIF2A
PEP5_VPS11_N
Beta-prop_EIPR1
Beta-prop_BBS7
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
130636375
NCBI-ProteinID:
XP_057302054
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All DBs
Position
3:24314568..24324295
Genome browser
AA seq
520 aa
AA seq
DB search
MTDLTLLQTFGQSFPEEFDGSLDSVSAALTCSFNRTGSLLAVGCNDGRLVIWDFLTRGIA
KIIVAHVHPISSVSWSRNGKKILTASTDWNVGLWDVLSGDCDVRYRFPSAVHKVQFHPFN
NKKFLVCPVKHPPVLVELDGEHHILPVGGECEQNIIASFDKKGDHIFAGNAKGKITIIHT
DTLQEKLSFRISTATNANTAIKSIEFARRGSSFLVNSQDRVIRVFNTDAVLSCKEGQEPE
PSQKLQDLVNRTLWKKCAFSGDGEFIVAGSSRQHALYIWEKSIGSLVKILHGTKGELLVD
VVWHPIRPIICSVANGLVSIWSQTHVENWSAFAPDFQEIDENIEYDERESEFDLEDEDKE
ELLNTSHDQQEELEIDVESIEKPLYYSSGDEPDDDCLFYLPVAPDIDDPEGDVVPGYDQK
PATDKSVLVDNTNQKMGENGPPKKKPKITDVNINGEVYNQNSVLAEKASEKPKGRGTTST
RGKRGGRKAGAGKGRKIVSAAVDVDDENSQDFSDASGKTA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgacagacttgaccttgttacaaacttttggtcagagctttcctgaggaatttgatggc
agtttggactctgttagtgctgcattgacctgttcatttaaccgcactggctcattgctg
gctgttggttgtaacgatggtagacttgtcatttgggatttcttgacaaggggcatcgca
aagataatagttgctcacgtacatccaatatcttctgtgagttggagtcgaaatggaaag
aaaatattaactgcgtcaactgattggaatgttggtttgtgggatgttctttctggtgat
tgtgatgtgcgttatcgtttcccatctgctgttcacaaagttcagtttcacccttttaat
aataaaaagttccttgtttgccctgtgaaacatccacctgtgttagttgaactggatggt
gaacatcacattcttcctgttggtggagagtgcgaacaaaatatcattgcatcatttgat
aaaaaaggtgatcacatttttgctggtaatgcaaaaggaaagatcaccataatccatact
gatactttacaagaaaaattgtcgtttcgcatcagcacagcaacaaatgcaaatactgca
atcaaatcaatcgagtttgcgagaagaggaagttcatttcttgttaattcacaagatcgc
gtcatcagagtattcaatacagatgctgtgttatcatgtaaagaaggacaagaacctgag
ccgtcacaaaaattgcaggatctcgtaaacagaacgttgtggaaaaaatgtgctttttcc
ggcgatggagagtttattgtggcgggatcctctcgacagcatgctttgtatatctgggag
aaaagcattggaagtttggtgaaaattttacatggaactaaaggagagttgttagtagat
gttgtgtggcatcctattcgaccaatcatatgctcagttgccaacggcttggtttcaatt
tggtcacagacacatgttgaaaactggtccgcttttgctccagactttcaagagattgac
gaaaacatagaatatgatgaacgggaaagtgagtttgatcttgaagacgaggataaagaa
gaattactcaacacaagtcatgaccagcaagaagaactcgagatcgatgttgaaagcatc
gaaaagccgttatattacagcagtggcgatgagcctgacgacgattgtttgttttattta
ccggtcgcacccgacatcgacgacccggagggagatgtagttccaggttatgaccaaaaa
cctgcaactgacaaatcagtgttggttgataatactaaccaaaaaatgggagaaaatggt
ccgccaaaaaagaagccgaagattacagatgtaaacattaatggagaagtgtacaatcaa
aacagcgtcttggcagagaaagcttcagagaaacctaagggaagaggtacgacatcaaca
agagggaagagaggtgggagaaaagcaggagcgggaaaaggaagaaaaatcgtgtcggca
gccgtcgatgtggacgatgaaaactcgcaagatttttctgacgcatctggaaagaccgcg
tag
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integrated database retrieval system