Hydractinia symbiolongicarpus: 130636682
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Entry
130636682 CDS
T09218
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130636682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsy03000
]
130636682
03036 Chromosome and associated proteins [BR:
hsy03036
]
130636682
Transcription factors [BR:
hsy03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
130636682
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
130636682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
SAM_PNT
zf-FCS_1
Motif
Other DBs
NCBI-GeneID:
130636682
NCBI-ProteinID:
XP_057302467
LinkDB
All DBs
Position
3:28766363..28790585
Genome browser
AA seq
957 aa
AA seq
DB search
MCYTCCILVGKRSEVQDKKKRHNKMEMKTKFRSTRSYEGLEDTDGTQSPKTRRRIANMQR
IKQHASNVDEINLRNPTDGSSAEKTLDTSININENNKIDPTSITEHDLVVDKFLDNQLNE
VYKHDILSSQENVTHYEVEEDSIVDPGVGKANAIVKNVIKEELCEDEHTGDDDKESISDR
RKKRKTKSKYNNMDNNDLEKMLKWKNGVGYLPGSNLKFRKSDIGALDLITPSDDEAEQEG
NEEENSLEKKFRKRRAVKRQEGGESTPLSATKIKKLDTPEHEKKKRKDRKKKFAEDELLK
CETCGCYGLISEFRSSGRFCSQRCVGAYASKRRAEMIAKQFASGERPLPKTVKRPLKKKK
RKHKDTPNRSPLTDKNNSTVLNEEEKISDDSTLYYDAVGRDVEFDWDIYLKVTDTQPANH
AAFVKEYPELDLFPTHATYFKPTMKLECVDIKHQSHICVVSVVEVQGARMRLHFDGWSES
YDFWINCDSPFLHPCGWCKQNGQKLNPPRGIHMDDFSWTDYLDKTGCKAAPAHLFHSPSP
TLHGFTTNMKLEAVDRKNPDLICVSSVNNVIGNHFLIHFDEWDDQYDYWCKEDSPFIHPV
GWCMENQVPLVPPTDEMVNKFVWEDYLKETNSIAAPKHIFKQREEEFFEAMSKLEVVDPR
NPSLVRVATITEVEEYRVKIHFDGWSELYDYWFDYDSTDLHPVNWCMKTGHTLEPPPVGK
DFEDARSCGTPGCRGIGHIKGLKYTTHHTSFGCPYTNQNLHRSTAPVVDRLAPNAMTEET
SICNRIHNKKFRSPEPDVFPDSTTKEESKKTPFGRATGKLLKKRHRLSDTPLNNHDKTGV
KKRKRRRSDEVSSSTSPSAHHIYDSKQPHKPIPSTHIPAGHSLYLQGKALVSKAIPWSQD
DVVEFLKRIGHEDLVPCFVDNQIDGQALLLLSQADLVHHLKLKLGPALKIYSEISKL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtgttatacatgttgcattttggtggggaaaagaagtgaagtgcaggacaagaaaaag
aggcacaataaaatggaaatgaaaacaaaatttcgttcaacaagatcttatgaaggcctt
gaagatactgatggaacacaaagtccaaaaacaagaagacgtatagcaaatatgcagcgc
attaaacaacatgcatcaaatgtcgacgaaattaatctgcgcaatccaacagatggttct
tctgctgagaaaactttagatacaagtattaacattaatgaaaataataaaatagaccct
acaagtattacagaacatgacttagtagttgataaatttttggacaatcaactaaatgag
gtatataaacatgatattttatcaagtcaggaaaatgtgacacattacgaagtagaagag
gactctatagttgatcctggtgtaggcaaggcaaatgctattgtgaaaaatgttattaaa
gaagagttgtgtgaggatgaacatactggggatgatgacaaggaaagtatttcagatcga
aggaaaaaaaggaaaacaaagtcaaaatataataatatggacaataacgacttagagaaa
atgttaaaatggaagaatggtgttggatatttgccaggtagcaatttaaaatttcgaaaa
tctgatattggagcattagacttaataactccaagtgacgatgaagcagaacaagaggga
aatgaagaagaaaattctcttgagaaaaagttcagaaaaagaagagctgtaaaaaggcag
gaaggtggagagtccactccgctcagtgcaacaaagataaaaaaactagacactccagag
catgaaaagaaaaaacgaaaagatcgtaaaaagaagtttgctgaagatgaattgttaaaa
tgtgaaacttgtggctgttatggattgatatctgaatttcgatcatcaggtcgtttctgc
agtcaacgctgtgtgggggcatatgcaagtaaaagaagagctgagatgatagccaaacaa
tttgcaagtggggagaggccattgccaaagactgtaaaacgacctttaaagaaaaagaaa
agaaaacacaaggacactccaaatcgaagtccattaacggataaaaataattcaactgtg
ctaaatgaagaagaaaaaatttcagatgattcgaccctgtattatgatgctgttggtcgt
gatgttgaatttgattgggatatatatttaaaagtaacagacacacaaccagcaaatcac
gcggcttttgtaaaggaatatccagaactagatttgtttccaacgcatgctacctatttt
aagccaactatgaaactggaatgtgtagatatcaagcatcaatcacatatttgcgtagtg
tctgtggtcgaggtgcaaggtgcgcgtatgcgtttacattttgacggttggtcggaaagt
tacgatttttggattaattgtgattctccttttcttcatccgtgtggctggtgtaaacaa
aacggacagaaactaaacccacctagaggtatacacatggacgatttcagctggacggat
tatttagataaaactggatgcaaggcagcgcctgctcacttatttcattccccatcgccg
acattacatggattcacaacaaacatgaaacttgaagctgttgatcgaaaaaatcctgat
ttgatctgtgtgtcttctgtaaataacgtcatagggaatcattttctgattcactttgat
gagtgggatgatcagtatgattactggtgcaaggaagacagtcccttcatacatcctgta
ggatggtgcatggagaatcaagtcccgctcgttccaccaactgatgaaatggtgaacaaa
ttcgtgtgggaagattatctcaaagaaacaaacagcattgctgctccgaaacatatcttt
aaacagagagaagaagagttttttgaagcaatgtcgaaattagaagttgttgatcctcgc
aatccatcacttgtacgtgttgcgactatcactgaggttgaagaatacagagtaaaaatt
cattttgatggatggagtgaactctacgattactggtttgattatgactcgacggattta
catccagtgaattggtgtatgaagactggtcatacgttagaaccacctccagttggaaag
gacttcgaagatgcacgttcatgtggcacgcctggttgtcgaggtattggtcacatcaaa
ggtttgaagtacacgacgcaccacacgagtttcggttgcccgtacaccaatcaaaatctc
caccgcagtacagctccagttgtcgatcgcctcgcaccgaacgcgatgactgaagaaacc
tccatatgcaaccgtattcacaacaaaaagtttcgcagccctgaacctgatgtctttcca
gattcaacaacgaaagaagaatcgaaaaagactccattcggccgtgcaactggtaagctg
ctaaagaaacgacaccgactttccgacacacctctcaacaaccatgataagactggcgtg
aagaaaagaaaaagaagaagaagtgatgaagtatcatcttcaaccagtccttctgcacat
catatatacgactcaaaacaaccacacaagcctattccatctacacatataccagctggt
cattcgttgtacttacaaggaaaggctcttgtcagtaaagccataccatggtcacaagat
gatgtggttgaattcttgaaacgaataggacacgaggatcttgtaccgtgttttgtagat
aaccaaatcgatggacaagcattacttcttcttagtcaggctgacttggtgcaccactta
aagttaaaactgggacctgctttaaagatatacagtgaaatatccaagctttga
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