Hydractinia symbiolongicarpus: 130636792 Help Entry 130636792         CDS       T09218                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K06237   collagen type IV alpha Organism hsy  Hydractinia symbiolongicarpus Pathway hsy04382   Cornified envelope formation hsy04512   ECM-receptor interaction hsy04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:hsy00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     130636792  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     130636792  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     130636792  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:hsy04147]     130636792    00536 Glycosaminoglycan binding proteins [BR:hsy00536]     130636792 Exosome [BR:hsy04147]  Exosomal proteins   Exosomal proteins of other cancer cells    130636792 Glycosaminoglycan binding proteins [BR:hsy00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    130636792 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  130636792 NCBI-ProteinID:  XP_057302619 LinkDB All DBs Position 3:33764261..33776867 Genome browser AA seq 1723 aa AA seqDB search MNLFTRSLIWIAIVLTTNSYLASSQKCGGTCTQCSNICVGKKGDRGSGGLPGYRGPPGLP GFPGPEGPIGAPGDKGDSGQPGMVGDAGSRGKVGPPGLPGNPGRHGHPGNDGRQGEPGLP GCNGTKGDRGPSGPRGRDGTRGDRGLTGDVGPAGEPGDSTATRLKGQKGEPGRDGDQGFT GDQGNTGEKGNTGAKGNRGRTGGRGLKGEPGFLRNLTYLGVKGDRGPKGIPGPPGIACQT QVTGNLTTVDAPKGANGTKGQKGEPGSQGPAGKSGEQGDDGEQGATGDRGERGAIGPKGS KGMIGNTGRSGEQGQRGEIGPVGSRGEKGDTGPKGDRGITGNAGRDGEPGRPATGTPGAQ GDEGPRGPAGSDGIQGPVGPAGPPGKMGETGPLGPKGNDGEPGPAGPTGENGNPGEPGMK GPTGPQGPQGEKGNTGIPGNPGLSMSGTPGMDGDTGPRGPPGEQGPTGFPGPAGKPGQVT TEKGEKIFPGAPGERGPPGLKGVEGEQGKTGRRGEKGAPCTSCPPGPQGERGLPGQAGID GAPGERGLKGEKGGIGAEGSVGNPGPRGETGPQGNPGEQGRQGANGAKGAAGKDIVINGE RGDRGEPGQPGSTGPVGFPGAIGPRGDPGSPGPPGENGIQGETGGNGAPGRNGIDGENGA NGEKGEPGVGERGFRGERGATGPRGLTGPRGPIGQPGKKGEPFPTILKGPPGLPGQKGNT GQAGPAGPVGPAGPPGVQGEDGQRGEPGNGEKGNKGNQGPRGQPGQVGERGRDGANGIRG EKGVPGQDGPAGPAGPIKGEKGDSGDPGERGKDGPPGTSAARGLPGAPGLNGTKGEKGDS GSRGSSGDPGTRGPPGNRGERGEKGDRGESRAGEKGDPGKEGKRGEKGRDGRDGQNGVGI PGPRGDQGESGNPGVGVRGPPGERGEDGLRGEPGKSGYKGDIGPPGKDGKDGTPGKDGAI GEPGETGKKGDTGPVGPEGREGERGEPGYVGEKGAKGNSGPRGPPGATSSVQGPKGSRGR PGQIGEPGRQGEPGGPGPQGEKGDPGIGTEKGNKGDIGPPGPAGEKGDRGERGSEGRQGE TGREGARGEPGREGPPGAIGDPGLQGRDGPAGPSGPPGEKGSTGFIGKPGDKGEPGPKGP KGDRGLYERGETGPIGPPGPTGPQGPPGKDYVLSVDKIETDIEKGSKGQRGKQGERGERG EKGEIGEPGVIGNVGEDGPAGDVGDKGDKGEKGRDGTQGTPGVKGNSGASGRDGPIGEKG DVGTPGQDGATGPQGQQGPEGPTGKSGEPGSRGDKGVAGPPGPDCPEVRGPTGERGEKGN TGNRGKKGEPGPPGESNEIGAKGDPGEPGEKGVEGAAGPQGEDGPSGREGATGPPGPEGF KGQKGEPGKLGPIGPKGKDAVGTGEKGDKGEKGATGPVGADGPRGEDGSRGPQGPPGPQG DKGDKGEDGLSGQNGQDGPAGPPGPQGVQGKEGVKGDFGPPGPAGKSGSADFGHYLVKHS QSTTVPECPTGMAKMWEGYSFLYSQGNGRSHGQDLGQPGSCLSRFSTMPFMICDLENKCT VASRNDYSYWLSARDEMTMMPLRDAEIERFISRCVVCEAPANVIAVHSQSLSIPTCPNGW RSEWVGYSLLQYNAAGAQGSGQMLQSSGSCLPNMRNNPYIECHGRGTCWYYATQVTFWLS TINEQNQFETPVSETLKGQDKVNRASRCSVCIKQTSTTSPNEP NT seq 5172 nt NT seq  +upstreamnt  +downstreamnt atgaatttgttcaccagatccttaatctggatagcaatagttttaacaacaaattcatac cttgcttcaagtcaaaaatgtggaggaacttgcacacaatgcagtaacatatgtgttggt aaaaaaggagataggggcagtggaggcttgccgggatacagaggacctccaggattaccg ggatttccgggtcctgaaggtcccattggtgcacctggtgataaaggagactccggacaa cctggaatggttggtgatgcaggatcaagaggaaaagttggaccacctggtctacctgga aatcctggaagacatggtcatcctggtaacgatggtagacagggagaacctggattgcct ggatgtaatggcactaaaggagatagaggaccgagtggaccacgaggacgggatggcaca agaggagatcgaggtttgactggagacgttggtcctgctggtgaacctggcgattcaaca gccacccgcttaaaaggacaaaaaggtgaacctggaagggatggagatcagggttttact ggagaccaaggaaatactggcgaaaaggggaacacaggggcaaaaggaaacagaggtagg acaggtggtagaggactcaaaggcgaaccaggctttctgagaaaccttacttaccttggt gttaaaggagatcgtggaccaaaaggtatacctggtccacccggtatagcatgccaaaca caagttactgggaatttgacaacggttgatgcaccaaagggagctaatggaaccaaaggt caaaaaggagagcctggatcacaaggtcccgctggaaagtctggagaacagggagatgac ggcgaacagggtgctactggtgacagaggagaaaggggtgcaattggacctaagggatcc aaaggcatgatcggaaacacaggcagaagtggagaacaaggacagaggggagaaattggt ccagttggaagtcgtggtgaaaaaggtgatacaggtccgaaaggtgaccgtggaattaca gggaatgctggaagagacggagaaccaggaaggccagcaacaggtacacctggagcacaa ggcgatgaaggtccgcgcggtcctgctggaagtgatggaatacagggacctgtaggacca gctggtcctcccggaaaaatgggagaaacaggacctcttggtcctaaaggtaatgacggt gaaccaggccctgctggtccaacaggcgaaaatggaaacccgggtgagccaggaatgaaa ggtcctactggtccgcaaggaccacaaggagaaaaaggaaacacaggcatacctggaaac cctggtctaagcatgagtggaacaccgggaatggatggtgatactgggccacgtggaccc ccaggagaacaaggaccaactggttttccaggacctgccggtaagccaggacaagttact acagaaaaaggtgaaaaaatatttccaggtgcccccggagaaagaggcccaccagggcta aaaggggttgaaggtgaacaaggtaaaactggtaggcggggagaaaaaggagcaccatgc acatcgtgccctcctggaccacagggagaaagaggtttgcctggtcaagcaggtattgat ggtgcaccaggcgaaagaggtttaaaaggcgaaaaaggaggaattggtgctgaaggaagt gttggtaaccctggtccgcgcggtgaaactggaccgcagggaaacccaggtgaacaagga cgtcaaggagcgaatggtgcgaaaggtgctgcagggaaagatatagttattaacggggaa agaggagatcggggtgagcctggccaaccgggaagtactggtcctgttggctttcccgga gctataggtccgcgtggtgatccaggcagccctggtccaccaggagagaatggaattcaa ggagaaactggtggtaatggagcgcctggtcgaaatggtattgatggagaaaatggtgca aacggagaaaaaggtgaacctggagtaggcgaaagaggattcagaggagaacgtggagct actggaccaagagggctaacaggtccaagaggaccaatcggacaaccggggaagaaaggt gaaccatttccaaccatcttaaagggcccaccaggtttgccaggtcagaaaggaaatact gggcaagcaggtcctgcaggaccagttggtcccgcaggtccaccaggtgttcaaggagaa gacggtcaaagaggagaacctggaaatggagaaaaaggaaataaaggaaaccaaggtcca cgtggacaaccaggacaagtaggagaaagaggaagagacggagctaatggcatacgtgga gaaaagggagtacctggacaagatggtccagcaggtccagctggtcctatcaagggtgag aagggtgattcaggagatcctggtgagcgagggaaagacggtcctcctggaacttctgca gcgcggggattacctggagcccctggcctaaatggcacgaagggggaaaagggtgactcc ggatcgcgtggaagttcaggcgatccaggaactagaggtccaccgggtaacagaggtgag agaggagaaaaaggagatcgtggagaatctcgtgctggagaaaaaggagatcctggcaag gaaggaaaacgaggagaaaagggacgtgatggacgtgatggtcagaatggagttggtatt cctggaccaagaggtgatcaaggtgagagcggtaaccctggagttggagttagaggacca ccaggagagcgaggtgaagatgggctacgtggtgaaccgggtaaatcaggctacaaaggt gatatcggacccccagggaaggatgggaaagatggaacaccaggaaaagatggcgcaata ggggagccaggagaaactggaaaaaaaggagacacaggacccgtcgggccggaaggaaga gaaggagaaagaggagaacctggatatgttggagaaaaaggagctaagggtaattctggt ccacggggacctcccggggcaacaagtagtgttcagggaccaaaaggcagcagaggaaga ccaggtcaaataggtgaaccaggaagacagggagaaccaggtggccctgggccacaaggg gaaaaaggagatccaggtattggtactgaaaagggaaacaaaggtgacatcggtccccct ggacccgcaggggaaaaaggcgacaggggtgaacggggttctgaagggcgtcaaggggaa acaggtagggaaggagccagaggtgagccaggacgagaaggaccaccaggtgctatagga gatccaggtttacaaggaagagatggaccagctggtccgtcaggcccaccaggagaaaaa ggaagcacaggttttattggcaagcctggagacaaaggggaaccaggcccaaaaggacca aaaggagatcgtggattatatgaaagaggagaaactggtccaatcggaccccctggacca actggaccccaaggaccgcctggaaaggattatgttttatctgttgataaaatagaaaca gatattgaaaagggtagcaaaggacagaggggaaaacaaggcgaaaggggagagcgaggt gaaaaaggagaaataggtgaaccaggtgttataggcaatgttggcgaagacggtccagca ggtgatgtcggagataaaggagataaaggagaaaaaggaagagatggtacccaggggaca cctggtgttaaaggaaatagtggtgcttctggtcgtgatggtccaataggtgaaaaggga gacgtaggtacaccaggccaggatggtgccactggccctcaaggacaacaaggtccagag ggaccaactggtaaatctggagaaccaggaagtaggggagataaaggtgtggctgggcca cctggtccagattgtcctgaagtaagaggacctactggagaacgtggagagaaaggaaat acggggaacagaggcaaaaaaggagaaccaggaccaccaggagaatcaaacgaaataggt gctaaaggtgaccctggtgagccaggagaaaagggcgttgaaggagctgcaggtccccag ggtgaagatggaccctctggtagagaaggagccactggaccaccaggaccagagggtttt aaaggacagaagggtgaacccgggaaattaggtccaatcggacctaaaggaaaggatgcc gtaggaacaggtgagaaaggcgacaaaggagaaaagggtgcaaccggtcccgttggcgcc gatggtccaagaggagaagatggtagccgagggcctcaagggccaccaggaccacaaggt gataaaggcgacaaaggggaagatggtctgagtggtcaaaatggtcaagatggacccgca ggcccaccaggcccacaaggtgtgcaaggaaaagaaggagtaaagggagattttggacca ccgggaccggcaggaaagagcggatcagctgattttggtcactatcttgtcaaacacagt caatcaaccactgtacccgagtgtccgacaggtatggctaaaatgtgggaagggtacagt ttcctgtactcacaaggaaatggaagaagtcatggacaagatcttggtcaacctggatca tgcttatctcgtttcagtactatgccatttatgatttgtgacttggagaacaaatgtaca gtagcctctcgtaatgattactcgtactggttgagcgcacgagacgaaatgactatgatg ccattgagagatgctgaaattgagaggtttatttcaaggtgcgttgtgtgcgaagcacct gctaatgtcatagctgtacacagtcaaagtttgtctattccaacttgtccaaatggatgg agaagtgaatgggttgggtacagtttattacagtataacgcagctggtgcacaagggtct ggacagatgctacaatcctcgggttcctgcttacctaatatgcggaacaatccttacata gaatgtcatggtcgtggcacatgttggtactatgcaacgcaagtcaccttttggctgtcc actataaacgagcaaaatcaatttgaaacacctgtttccgaaacactgaaaggtcaagat aaggtcaatcgagctagcagatgctctgtttgcattaaacagaccagcacaacatccccg aacgaaccttag

DBGET integrated database retrieval system