Hydractinia symbiolongicarpus: 130640988
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Entry
130640988 CDS
T09218
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130640988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130640988
03036 Chromosome and associated proteins [BR:
hsy03036
]
130640988
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130640988
Coactivators
SAGA/TFTC/STAGA complex
130640988
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130640988
STAGA complex
130640988
TFTC complex
130640988
SAGA complex
130640988
SLIK complex
130640988
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
TFIID_NTD2
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_VPS8
CFAP251_N
Beta-prop_SCAP
DSE1_N
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_Aladin
Beta-prop_Vps41
PAC11
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_DCAF4
ASA1
eIF2A
WD40_like
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_pof12
Beta-prop_WDR11_2nd
Tricorn_2nd
Beta-prop_Nup120_160
LisH
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
130640988
NCBI-ProteinID:
XP_057303595
LinkDB
All DBs
Position
4:complement(6343640..6449179)
Genome browser
AA seq
661 aa
AA seq
DB search
MSGASNLDDEKQSLLAVLQFLKKKNLKGAEEALRKETGLDSVSTETHTTTENEPDLSNVL
SEYESDADPLRYEEYYQGLQEFVDKSLDIHKHELSLVLYPVFVHLYLECVYKGYVTEAEK
FYIKFSKFQESYRQEDLEKLRMLKQRDHMHTKNEYLNLFRSNKYVIKMARESFNVLKKYL
QLQKQDVLLNLIQQHFHLDVFDGRPRSKRTIEATTGYLTGEAPPDANKSKVFFGLLHDPE
LLAALADDGDSDEDKDEVAMDNKEKPKKKKSKRDDAKKRHATDPNAPKPDRIPYPKLKDS
EKRWKLAMYKDISRRLHVAPDKIPSVCFYTFLHTQEGLNCVDISEDSSLIASGFDDSTVR
IWTLTPKKLRMLKTVNELAKIDKEADDVLERILSDKSAVESRTMCGHSGPVYGLSFNREK
SFLASGSEDGTVRLWSLHTFTNVVALKGHLYPVWDVKFSPRGYYFVSGSYDRTARLWCTE
NAHPLRIFAGHLSDVNVVDFHPNGNYVATGSADRTVRIWDLHSGSSVRLFTGHKAGVQSV
RFSPDGRHLVSSGADNRVLLWDIGEAAPLADFEGHTANVHSLCFSREGHMLATGGMDNCV
KLWDVKAASHMDDDNDGISSSSSTQKSFELASFVTKSTPVHHLHFTRKNLLLASGPFMPP
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgcaagtaaccttgatgatgaaaaacaatctttgttggctgtcttacagttc
ttaaagaaaaagaatttaaagggtgctgaagaagccctcaggaaagaaaccggtctcgat
tctgtttcaactgagactcacacaactaccgaaaatgaacctgatctttctaatgtgtta
tcagagtatgaaagtgatgctgatccgttacggtatgaagagtactatcaaggacttcaa
gagtttgttgataaaagtcttgatattcataaacatgaattgtctctcgtcctttaccca
gtgttcgtgcatctctatcttgaatgtgtttacaaaggttacgttacagaggcggaaaag
ttttatataaagtttagcaagtttcaggaaagctaccggcaagaagatcttgagaagttg
cgtatgctgaaacagcgtgatcatatgcatacaaagaatgaatatttaaacttattcagg
agtaacaaatatgtcattaaaatggcgagagaatcatttaatgtattgaaaaagtatcta
caattgcagaaacaagacgtcctgttaaacctgattcaacagcattttcatttggatgta
tttgatggccgacctcgaagcaagcgaactattgaagccaccaccggttatttaactgga
gaagctccacctgatgcaaacaaatcgaaagttttctttggattacttcatgatcctgag
ttattagcagctctggctgatgacggtgatagtgatgaagacaaagatgaagtggcaatg
gataataaagagaaaccgaaaaaaaagaaatcaaagagagatgatgcaaaaaaacgccat
gctaccgatccgaatgcaccgaagccagatcgtataccgtatccaaaattaaaagatagt
gaaaagagatggaagttagcaatgtacaaagatattagccgacgcttacatgttgccccg
gataaaattccttcagtttgtttttacacatttctccacacacaagaagggttgaactgt
gttgatataagtgaggattcttcactcatcgcgtctggttttgatgactccactgttcga
atttggacgttaacgcccaagaaattgcgcatgttaaaaacagtgaacgaacttgcgaaa
atcgacaaagaagccgatgatgttttggaaagaatactaagcgataagtctgctgttgag
agtcgcaccatgtgtggccattctggacctgtgtatggtcttagcttcaatcgtgagaaa
agctttcttgcttcaggttcggaagacgggacagtacgattatggagcttgcacacgttc
acgaatgtcgttgcattgaaaggacatttgtatcctgtgtgggatgtcaagttctcacct
cgtgggtactattttgtctctggttcgtatgaccgcaccgctcgattatggtgtactgag
aatgctcatcctcttcgaatatttgcaggacatttatctgatgtgaatgtggtagatttt
catccgaacggtaactatgttgcgacgggttctgctgaccgaactgtccgaatttgggac
ttgcactcgggaagttctgttaggttatttacaggacataaggctggtgtacagagcgtt
cgattctcaccagacggacgccatctcgtttcatcaggagcggataatcgtgtgttgtta
tgggacatcggtgaagccgcaccactggcagattttgaaggacatacggccaatgttcac
tccctgtgttttagtagagaggggcatatgcttgcaacaggaggtatggacaactgtgta
aaactttgggatgtgaaagcggcttctcacatggatgatgataacgatggcatttcatca
agttcttccactcagaaatcgtttgagctagcatcattcgtgacgaagtctacaccagtt
caccatttacatttcactcgaaaaaatttgttactcgcttcaggtccatttatgcctccg
acataa
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