Hydractinia symbiolongicarpus: 130641044
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Entry
130641044 CDS
T09218
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130641044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsy03009
]
130641044
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130641044
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
Utp12
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
WD40
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ASA1
Beta-prop_SPT8
Beta-prop_Nup120_160
TMEM158
MNE1
Beta-prop_Aladin
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
130641044
NCBI-ProteinID:
XP_057303662
LinkDB
All DBs
Position
4:7697258..7715940
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AA seq
667 aa
AA seq
DB search
MESGFGDSRSSFTVNGDFFALLSVDGRLRIWDTSSGKLVQEFSPALHVESSCTCLCWTRG
ISDKNKKEPRRKKRKVVKTETNDSISHTPYPSLLLGTKSGTLRSYDPVAGDIGEKFDDGH
VKSVNNVLYHKDADTLYSCSDDKYIIEWSYDSHEAISKWKADKVSVKRICLGPSGTTLLS
AGQSIKLWNLETKELLQRFHGHTSPVSLLQFSPFQMSRNKSDTYDDGYYFLSGSTEDSII
NAWHINIKNPEKTAIASYMLSDVPSFMDSLLITTDNQPLKLCVGCRDGRIHFFSNTMNGK
TKRPLESSKTLDLLQREGERSNTTAVPFLKARLYDENGMVLLLVSGTSLKPMFKRFVYSK
LEETTRIIQELTQNMLLKDIISDSDNAVEIADQKAKTKVIGNTNFTPIPLKNRARPTLDL
NDNEQDRSNTTSEENIVSMEERLKVAGHGDMLVPKIKPSKSIPNASSFAQMLVQGLHSGD
NTLINEILFKSCKDNILRNTVKRIPNNLVGLLLSEVVDKLQRNPARSKVLSSWLRVIMAV
HLTYLMTNENLSGTLGSLYNILKMQQDIHPQLINLNGKIDLLLSHASSSKRISSEDDEST
NPTVVFNDNSDDETEELFGKLIESEEEIEVDEEENSPDEDEEESDDTNDDEIDDNENEQS
ENESDRY
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaggctttggagatagcagatcatcatttactgtaaatggggatttttttgcg
ttattatctgttgatggtcgactaagaatttgggatacatcatcaggaaagctcgtacaa
gagttttctccagccttacatgttgaatcgtcgtgtacctgcctttgttggacgcgtggc
atttctgataaaaataagaaggaaccgcgaagaaaaaaacgcaaagttgtgaaaaccgaa
accaatgacagtatttcacacacaccttacccatcactcttgcttgggacaaaaagtgga
acattgcgtagttatgaccctgtggctggagacattggagaaaaatttgatgatggtcat
gtgaaatcagtaaataatgtgctatatcacaaagatgcagatacattgtattcgtgctct
gatgataaatatattatagagtggtcatatgacagtcatgaagcaataagcaaatggaaa
gcagacaaggtgtcagttaaaagaatttgtttgggaccaagtggcacaactttgttatct
gctggacagtcaataaaattgtggaacctagaaaccaaagagttactacagagatttcat
ggacatacctctccagtctccttactacaattttctccattccaaatgtcaagaaataag
tctgacacttatgatgatggttattactttttaagtggatctacagaggacagtataata
aatgcatggcatattaatataaaaaatccagaaaagactgctatagcaagctacatgcta
tctgatgtaccttcctttatggattccttattaatcactactgataatcaacctttaaaa
ttgtgtgttggatgtagagatggcaggatacattttttctcaaacaccatgaatgggaaa
accaaaaggcctttagaaagttctaagacattggatttgctccaaagagaaggagaaagg
tcaaatacaactgcagtaccatttctcaaggccaggctatatgatgaaaatggaatggtc
ctattgttggtgtcaggcacaagtctaaaaccaatgttcaaaagatttgtctattcaaaa
ttagaagagacaacaagaatcatccaagagctcacacaaaatatgctcttaaaagatatt
atcagtgacagcgacaatgctgttgagatagctgatcagaaagctaaaacaaaagttatt
gggaacacaaactttactccaattccactaaagaacagggcacggccaacactggattta
aatgataatgagcaggaccgaagtaacaccacctctgaagaaaatattgtctcaatggaa
gagagactaaaggttgccggtcatggtgatatgttggttccaaaaatcaaaccatcaaaa
tcaattccgaatgcatcatctttcgctcaaatgttagtgcaaggtctacacagtggcgat
aatacattaattaacgaaattttatttaaatcatgtaaggacaatattttacgaaacacg
gttaaaagaattccaaacaaccttgttggtcttcttctttcagaggttgttgataaactg
caacgaaatccagcaaggtcaaaggtcttatcatcctggttaagagtaataatggcggtc
catttgacatacctaatgacaaatgaaaatctcagtggcacattgggaagcttgtacaat
attctcaaaatgcaacaagacattcacccacagcttatcaatttaaatgggaaaattgat
ttgttgctttcacatgcaagcagcagcaaacgaatatcaagcgaagacgatgaaagtaca
aatcctactgtcgtttttaatgataattccgacgacgagactgaagaattattcgggaag
ctgattgaatcagaagaagagatagaagtggacgaggaagaaaattcaccagacgaagac
gaagaggaatctgacgatacgaatgacgatgaaatcgatgacaatgaaaatgaacaaagt
gaaaacgaaagtgatcgatattaa
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