Hydractinia symbiolongicarpus: 130641329
Help
Entry
130641329 CDS
T09218
Name
(RefSeq) rootletin-like isoform X1
KO
K16469
rootletin
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsy03037
]
130641329
Cilium and associated proteins [BR:
hsy03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130641329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
ERM_helical
CENP-F_leu_zip
INO80E
CCDC39
Motif
Other DBs
NCBI-GeneID:
130641329
NCBI-ProteinID:
XP_057304062
LinkDB
All DBs
Position
4:12374673..12399122
Genome browser
AA seq
2157 aa
AA seq
DB search
MSYLEESPSKQRIDSGDDLQSVIKRLEEVHLHTPGSKDQSSEIPARIRDIVTKSISPLDA
DKDEAANLIEENQSLKVELSRVEDRLASIRADRQFHSLPAYRMSDTVKSQSMDQLSFNSN
IASDSYVQQISLLKQKLDDEHTNYKRKLQAYQDGQQRQAQLIQKLQSKVLQYKRRNGEQE
TVINEKDVEIEKLKSQLRNADIALKEYEGRIKESEDEQNNDLESSLIRLEEEQQRNSSLQ
HVNNMLREQLEQATAANNSLTLEIQKVTSDWSKACEELEHRESEEEKYFSEEHEKLMALW
SAINSFRKNFNDMKIETQKDLSQVKAEVSRSARTIQSAAMSVEKAQRGSLINQTTLDDEQ
TRREKAEALLREKIQENIELKSICDKYKDQISSRLNENSTHVKELESELQDKNSEIETLR
KNLQNMGAELVEQSDKWENDSQASIVAIREEADILQNTLQELANCIIDDTENTARMLNTT
FGSKLDRSNMDDEESDNELSFSSPTRSRKSRQSTSPSRMARMRSMSPVRARSPAVADSAI
SAAQSALKKRQLQLQELKNNYDNVCNDNQTLKGQLQAANQQVKQLQDSINKLQDDHSSIK
SNMHGVNQDCMKYKQQIELLQNEKLNLEKGRSSLLTQVEDKYSEVEKVKNSNVGLQRQVE
NLEDEKENILHEKERISKDLQRSKALMEQLEQKHSMLKEELVDVKEKLNRSQLTKDVLEQ
EKLHLTEILSKTEIQREDIEAEVSRCKNDEVQLKDALVKLQSLNEALGQDKMDLNKIIRQ
IEIERDTLLSDKQELEMEKSSMKEELLRTEKERIEIESEKASLDQTLNQTESSKGKLEEQ
MQEIIRSKTELNDSLNSVAREKDFIQNDLNQAKQEKERQAANILRLSKEKEELTREKAHL
IVQLNGSERDNRLLSEANISMKSEKDSLETSLYELQQLVAKLETRKQQLEAENHELVLNK
EAMTVDLARLKKEYEIDAMKLSKQIELLEQQNAQCIRDHEVAINRVKQEHEEEMQGISQE
KEQCILQAGQDNCAAINELRAEMENFQSKAEREKTNLINEVACVQKERDDLLMEAESDKQ
EELRIAASEKGLLMEKLNRLAEELDYAKIELEKFKREATQRASQEKDLLNNSQMELKSVK
DQLNETISQYESKINELTSAVEDLTRNKDLLSKELSDLKLQYKMLEESREAVQREYKKAQ
RQCHDVTEMFESSQKDVSEYKRWLKDSETEKEITLNSVNELHEVVKATEGEKITYKQKLD
EANKMMAQLEESNLAQMKEADELRSNIRELEASRQEARREIQQLHNQVRLLDNDCLKYKK
EMSLLKDQLEKNERLLEEERQDVSRTKQKLAESESIRDAAKREASQLSNKMADYNENARV
KEKDLQIAVDDAKRNEMKAAEKVKNLENLLDNLNQEKSDLNLRLSSAEGRNAGLENQLSK
LESSKNEIEFKLSSLHSTLRRTLGIRSSQSPSKTRSPSPTRTSSPKRRTLFGRNRTPASF
QEEIDQEEESPTKDMSDSSRFDITSDIDPEFIKTSLRDFAQKLKDLERERDEAIAQCGGL
ERQLVDLENDRNECEQRVQTLQKNLQDTEEGKRGADGRLSSAQTALMLQEETIRRLERER
KVLNEKLQALETNLAQSESDRRALKEKHAKLVKNETRSEQEREAMRAQIDNAESRITRID
LKKKSLEGDIERLRMQHQDSETERHTLKQRVEQLSRLQQESEQNNTTLQLTIDRLNTALS
KSSDQEKLFKQKVTELSMSLNETNSSTQSLQDKLQQVQRALVNSEQERHLLHEKHEQFKL
QQLEAKRTIESLNEKIQMLKHNIADAESKRLDLESELRQTQQLMHKRQTTEEDLGTKLVK
LQEEKRSLQDRLAQQQRVLSQAEQEKREMERNSLRVEKDRKALKQAMERAERDKQMVEEE
LNRTRGEKSDLDRSLSNHDQEVNELSMQLSQLQQAYEDKEQHYSKKVTDLQTRHREELDR
ENERNKNAQQHLERTHAARERAHKQRTRGLEEQINTLKDQLNKEMQQKQSFINRTTLKND
EMRDIRHKLASSLTEVSKNADLNVLERESRKLDETADSHHSFSGRSSFTSSTPFQRRAKS
SSPLARMSPDRYNNNYVLPPSSDAGFTTATHHATPITSDKKSSYVSPLRKTRKPLHS
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atgagttatctagaggaatctccttccaagcagcgaattgacagtggggatgatttgcag
tcagtcattaagaggttggaggaagtccatttacatactccaggaagcaaagaccaatca
tcggaaattcctgctcgaattagagacatagtcaccaaatccatatcaccactggatgca
gataaagatgaggctgctaacttaattgaggaaaatcaaagtctgaaagttgagctgtca
cgtgtggaggacaggctggcatctatccgtgctgatcggcagtttcatagtttgcctgca
tacaggatgagtgatacagtcaagtctcaaagcatggatcagctgtcttttaactcgaat
attgcatccgattcgtatgttcaacagatcagcttgttgaaacaaaaacttgatgatgag
catacaaattacaagcgaaaactgcaagcttatcaagatgggcaacaacggcaagcacag
cttattcaaaagctccagagtaaagttcttcaatacaaacgccgaaatggagagcaggag
actgtaataaatgagaaagacgtggaaattgagaaattaaaatctcagctacgaaatgca
gatattgcacttaaagaatatgaggggagaattaaagagtcagaagatgaacaaaataat
gacctagaaagttctttgattcgtttggaagaggaacagcagagaaacagcagtttgcaa
catgtcaacaacatgcttcgagaacaattggaacaagctactgctgcgaataattcattg
acacttgaaatccagaaagtcacatctgattggtctaaagcttgtgaagaattagaacac
agggaatctgaagaggaaaaatattttagcgaagaacatgaaaagttgatggcactgtgg
agtgccatcaatagcttccgaaaaaattttaacgacatgaaaattgaaacacaaaaagat
ctttcacaagtaaaagcggaagttagtcgttcagcgagaaccatacaaagtgcagctatg
tctgttgaaaaggctcaacgaggttccttgattaaccaaactacattggatgatgaacaa
acgagaagagaaaaggctgaagctctactgcgtgaaaaaattcaagaaaatattgaactg
aaatcaatttgtgataagtacaaggatcaaattagttcaagactaaatgaaaattccact
catgtcaaagaattagagtctgaacttcaagacaaaaactctgaaattgaaactctaaga
aagaacctgcagaacatgggtgctgaattggtagagcaatcagacaagtgggaaaatgac
agccaagccagcattgtagctattcgagaagaagcagacatacttcaaaacacacttcaa
gaattggctaactgtattattgatgacactgaaaacactgctcgaatgttgaacacaacc
tttggttccaaactggatcgaagcaacatggatgacgaagaaagtgataatgaactgagc
ttttcttcccccacaagatcacgtaaaagcagacagtccacctccccgtcaagaatggct
cgaatgagatccatgtcccctgttagggcacggtctccagctgttgctgattcagcgata
tctgcagctcagtctgcattaaagaagagacaacttcaacttcaggaattaaaaaataat
tatgacaatgtttgcaatgataatcaaactctgaagggacagcttcaagctgctaatcaa
caagtgaaacaattgcaagatagtatcaacaaattgcaggatgatcactcaagcattaag
tcgaatatgcatggtgtaaatcaagactgcatgaaatacaaacaacagattgaattgctt
caaaatgaaaaactgaatctagaaaaaggccgttcgtcgttgctgactcaagtggaagac
aagtattctgaagtcgagaaagtgaagaactccaatgttggactgcaaagacaagttgag
aatctagaggatgaaaaggaaaacatactgcacgaaaaagagaggatttcaaaagacctg
caaaggtcaaaggcattgatggagcagttagaacaaaagcattcaatgttgaaagaagaa
cttgtggatgtaaaagagaaacttaaccgctcgcagcttacaaaggatgtgctggaacaa
gagaagttgcatctaactgagattcttagcaaaactgaaatccaaagagaagacatagaa
gcagaagtttcaagatgtaaaaatgatgaagtacaattaaaagatgctttggtgaaattg
caaagtttgaacgaggcgttgggacaagacaagatggatttaaacaaaataattcgacag
attgaaattgaaagagacactttactttctgataagcaagaacttgagatggagaagtca
agcatgaaagaggagctcttacgtactgaaaaagaacgtattgaaattgaatcagaaaaa
gcaagccttgatcaaacactgaaccaaacagaatcgagcaaaggaaaactcgaagagcaa
atgcaagagattattcgaagcaaaaccgagctcaacgattctctaaattctgttgcacgc
gaaaaggatttcattcaaaacgatttgaaccaagccaagcaagaaaaagaacgccaagct
gctaacattcttcgcttatccaaggaaaaggaagagctgacaagagaaaaagctcatctt
attgtacagttaaatgggagtgagcgagacaacaggttgttgtcagaagctaatatatcc
atgaaatcagagaaagactctttagagacttccctgtacgaactacaacagttggttgcc
aaattggaaactcgtaagcagcaattggaggcagagaatcacgaacttgtcttgaataaa
gaagccatgactgttgatcttgcccgtctgaagaaagaatacgaaattgatgctatgaag
ttgtccaagcaaatcgaattgctggagcaacagaatgctcagtgcatcagagatcacgaa
gttgcaataaacagagtgaagcaagaacacgaagaggagatgcagggaatttcacaggag
aaagagcagtgcatattacaagctggtcaggataactgtgcagctataaacgaattgcgt
gctgaaatggagaactttcaatctaaggctgaacgtgagaagactaacttaattaacgaa
gtagcttgtgtgcaaaaagaacgcgatgatctgttgatggaagcagagagcgataagcaa
gaggagcttcggattgcagctagtgaaaaaggtttgctcatggagaagttaaatcgcctt
gcggaggagttggattacgctaaaattgagcttgaaaagtttaaacgtgaagcaacacag
agagcttctcaagaaaaggacttgttgaataacagccagatggaattgaagtcagtaaaa
gatcagttgaatgaaacgatatcacaatacgaaagcaaaataaatgaactcacaagtgct
gttgaagacttgaccagaaacaaagacttgttgtcaaaggaactgtcggatttgaaactg
cagtacaaaatgttggaagagagtcgtgaagctgttcaacgagaatacaagaaagctcaa
cgacaatgtcatgatgtcactgagatgtttgaatcgtcccagaaggatgtgtctgaatac
aaacgttggctgaaggactctgaaacagagaaagaaatcacattgaacagcgtgaacgag
ctgcatgaagtcgtgaaagcaacggaaggagagaagataacctacaagcagaagttagac
gaagccaataaaatgatggcgcaattagaagaatcaaatcttgcccaaatgaaagaagca
gacgagctgcgctccaacattcgcgagttggaagcgtcgagacaagaagcacgacgtgaa
atacaacaacttcataatcaggttcgactccttgacaatgattgcttaaaatataaaaaa
gaaatgagcttgttaaaagatcaacttgaaaagaacgagagattactagaagaagaacgg
caggatgtttcacgcaccaaacagaagttggcagaatctgaatcgattcgtgacgctgca
aaacgtgaagcaagccagctaagtaataaaatggccgattacaatgaaaatgctcgagtg
aaagagaaagatttgcaaatagctgttgacgatgcaaaaagaaacgaaatgaaagctgca
gagaaagtaaagaatctggaaaacctgttggataatttgaaccaagagaaatctgattta
aacctacgattatccagcgccgaaggtagaaacgcagggctagaaaaccaactatcgaaa
cttgaatcgagtaaaaatgagattgagtttaaactgtcgagtttacattcaactcttcga
cgcacgttaggaatccgctccagccaatcaccgagtaagaccagatctccttcgccgaca
cggacgagcagtccgaaacgtcgaacacttttcggtaggaatagaactcccgcttctttc
caagaagagattgatcaagaagaagaaagtccaaccaaagatatgtcagattcatctcga
ttcgacattacaagcgacattgatccagaatttattaaaacctctttacgcgatttcgct
caaaagttgaaagatttagaacgtgaaagggatgaagcgatcgcacaatgcggtgggctt
gaaagacaactcgtggatttagaaaacgatcgaaatgaatgtgagcagagagtgcaaacg
ttgcagaagaacttacaagatacagaagaaggcaaacgaggggctgatggcaggctaagt
agtgcacaaacagcgttgatgctacaagaagagacgatacgacgtttggagcgagaacgg
aaagtgttaaatgaaaaacttcaagctcttgaaacaaacctagctcaaagtgaatcagat
agaagagcgttgaaagagaaacacgccaaacttgtcaagaatgaaacgcgatctgaacaa
gaacgtgaagcaatgagggctcagattgacaatgcagagtcaagaattacgagaattgac
ttgaagaaaaaatcactcgaaggtgacattgagcgcttgcgtatgcagcaccaagattcc
gagactgaaagacatacccttaaacaacgtgtcgaacaactgagtcgcctacaacaagaa
tcagaacaaaataatacaactcttcaactgactattgatcgtttaaatacagcattgtcg
aagagcagtgaccaggagaaactgttcaaacaaaaagtcactgaactatcaatgtctctc
aacgaaacaaactcctccacacagtcgcttcaagataagcttcagcaagtgcaacgtgct
cttgtgaacagtgagcaggagagacatcttttacatgaaaagcacgaacagtttaaattg
caacaactagaagcaaaaagaacgatcgaatcgctgaatgaaaaaatacaaatgttgaag
cataatattgcagatgctgagagcaagaggttagatttggaaagtgaattacgtcaaacg
caacagctaatgcataaaagacaaactacagaagaagatctgggtactaaattggttaaa
ctgcaggaagaaaaacgcagtcttcaagaccgccttgctcagcagcaacgcgttttgtca
caagctgaacaagaaaagagggaaatggagagaaatagcttaagggtggagaaggatagg
aaggctttgaaacaagccatggaacgtgctgaacgagacaagcagatggttgaagaagaa
ctgaatcgcaccaggggtgagaagtccgacctcgatcgctcactttcgaatcatgatcaa
gaagtaaacgaacttagcatgcaactttcacaactacaacaagcgtacgaggataaagaa
cagcattactccaaaaaggtaaccgacttgcaaactcgacatcgtgaagaattagatcgc
gaaaatgaacgcaacaaaaacgcacaacaacacttagagcggacgcatgctgcacgcgaa
cgggcgcacaagcaacgcacacgagggctggaggagcaaatcaacacgctaaaagatcag
ctgaacaaagaaatgcaacaaaagcaatccttcatcaatagaacgaccctcaagaacgat
gaaatgcgagatattcgtcacaaattggcgtcgtcgttaacagaagtgtcaaaaaatgcc
gacttaaacgtgctggaacgcgaatctcgcaagctagacgagacagctgattcgcatcac
agcttcagtggacgctcttcattcaccagttcaactccttttcaaagaagagcgaaatca
tcctctcctcttgctagaatgtcacccgacagatataacaacaactacgttttgccgccg
tcaagtgacgctggtttcacaacagcaacacatcacgccacacctatcacgtcggacaaa
aagtcaagctatgtgtcgccgttacgcaagacaagaaaaccgttgcattcgtga
DBGET
integrated database retrieval system