Hydractinia symbiolongicarpus: 130641799
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Entry
130641799 CDS
T09218
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy02010
ABC transporters
hsy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130641799
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130641799
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsy02000
]
130641799
Transporters [BR:
hsy02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130641799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_15
AAA_29
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
130641799
NCBI-ProteinID:
XP_057304745
LinkDB
All DBs
Position
4:21243792..21279196
Genome browser
AA seq
1797 aa
AA seq
DB search
MAGVFRKLRLLIWKNFILQIRRPIGTAVEILLPIAFLSLLILARQLIKNNEKCFSTFNHL
NIPSQDYINDYVKRLKGEKILVTGRLTIAYYPHTEITTKLIEKVARGVNVGVAYNDSNGI
SFASKDDLLNEVKEFTDKYLGAIIFENVEANKPFPKTVEYSIRLHHSTGELYDSSVKSWM
TRWVYPFFQQASPRKSSFYLSPFLSLQYFMDSAILQHYTSANYTVAEDIQQFPYPDYIED
TFIQIIQGTMPLVFVLAYVYSAVMIVKELVAEKQCRLKESMKMMGLANWVHWTAWFIKIF
LFLFLSIIIQTAILKGGKIFEFADTGVVFVFLLLYFLSTIFYLFFCSVFFSNAIRGMLFA
AVLWFATYAPFSTFAQPEKFEELSSEKKFASCLLPNTCLGIMVQIISRRESSKVGVTWDN
INKKTSVDDNFTLATAFGVLILDCVIYGILTWYIENVFPGEYGVPRPLYFPFQPSYWCGS
RSTSQFGSLEELKGNKVHPNADFEDEPEDLNIGVSIKELRKVFDSAAGKKVAVDGLSLNI
YKGQITALLGHNGAGKTTTMSILTGLFSPTSGEATINGRSIYTDMDGIRESLGLCPQHNV
LFDRLTVKEHLEFFSALKNVPKAQGKIEIDQMINDIQLKDKANQMSSTLSGGMKRKLCCA
IALLGGSETVFLDEPTSGMDPYARRATWDLLQKYRANKTIILTTHFMDEADHLGDRIAIM
ADGQLRCCGSSLFLKKRYGVGYHMTLVKGDNFQETKTRSLISQHVPTSKMVGNVGMEISY
ILDEDSTKQFKGLFEVLEEKKDEFGISSFGISVTTLEEVFLKVGEGETLGIENEATDNDG
DDVVKLHNIDRTESMIARDTLLTGFALKTTQFKAMFIKRFLNSKREKKALITQIVLPLLL
VLVGLLLSMSGNSQDDDPKRFLNLNMLNVESESLSAFFADTSANENSSLASMASKVYDAA
GVSLFRDISSNVKYIKEGNSGNNIALFINSSNEYSQKISADKKECCNYKYLLLNKQCQNY
GDKYSSLCGTEPKTFAYKNCMKCIDDKLDCEETPTLDKIKSTSDTRLYFQEYVLEDSGKN
LKSYFNDKVAGLTLENNNQYTVWYSNQAWHTIVAAFSAASNVIVKFHKNETYGIKTNNFP
LPKNTKEKGESISANSSNLTLVIFVTMAACFVAASFVTFIVTEKTSKAKHIQFVSGVDSI
SYWGASYCWDFINFLIPGIGIIILFAAFNLDEYEGALGEVFLIIIMFGVSVLPFVYVISF
LFSSALIGYAVIALLLMVISLAMVLAVFILKSTGEENVADTLNYMFLILPTYAFPQALTD
LATNVGLNRACTVNPKAIIGCQVTGRNYEENLLAWKYPGIGVHLLYMFVEALFFFFLTLL
IEERFFLGSCCGSNNAKGFSKREGEDIDVQAERERVFKMSQEEIEKSAVVLQDLTKVYRT
TGMTAVDHLNCAIPKAECFGLLGVNGAGKTTTFGMLTGELGITDGTAFMHGYNIQTQLND
VQQRIGYCPQFDALVERLTGREMLTMFARLRGIPSHLIEDVVKSAIEQLNLGKWADKLCG
DYSGGNKRKLSTAMALVGDPSVVFLDEPTSGMDPASRRFLWDTLTSVINTGRSIVLTSHS
MEECEALCTRLVIMVNGQFKCIGSIQHLKSRFGQGYTIMLKISKNKPGDPQMGSANNPMY
NDDSSTLQVPPQGALAQSSSSQNIAINSERVKTFVHESFPGAVLVEDRQSLLQYQIINPN
LRWSHLFGTLEKHAEELGIIDYSVSQTSLEQVFINFAKNQHSEDRIFNKKFCSCMCF
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgtgttcagaaagttacgcttgctcatttggaaaaatttcatcttgcagatc
aggcgtccaatcggcactgcagttgaaattctgttacctattgcatttttatcactgctt
attttagccaggcaacttattaagaacaacgaaaaatgtttttctacttttaatcatctg
aacattccaagccaagactatattaatgattatgtaaaaaggctgaagggtgaaaagata
ttggtgacggggcggttgacgatagcatattatccgcacactgaaattaccacaaaattg
attgagaaagttgcaaggggagttaacgtgggcgtggcatataatgattcaaatggaatt
tcgtttgcatcaaaagacgatctcttgaatgaagtgaaagagtttacagataaatatttg
ggagcaatcatattcgaaaatgttgaagccaacaagccgtttccaaaaactgtggagtac
tcaatacggctacatcattcaacaggagagttgtatgattcaagtgtaaaatcttggatg
acacgatgggtttatccattttttcaacaagcttcgccacgcaaaagcagtttttatcta
agccctttcttgagtcttcagtatttcatggattctgctattttgcaacattacacaagt
gctaactacacagttgcagaagacatccagcaatttccatatcctgattatattgaagat
acctttatccaaatcattcaaggcaccatgcctcttgtctttgttttggcatacgtatac
agtgctgttatgattgttaaggaactggtagcagagaagcaatgtcggttaaaagagagt
atgaagatgatgggactggccaattgggttcactggacagcctggtttattaaaatattc
ttgtttttgttcttgagcattattatccaaactgcaatactgaagggtggtaaaatcttt
gagtttgcagatactggcgttgtgtttgttttccttctgttgtactttctttccaccata
ttctacctgttcttctgcagtgtatttttctccaatgcaattcgaggaatgttatttgct
gcagttttgtggtttgctacatatgcgccattctcaacatttgcacaaccagaaaagttt
gaggaactaagcagtgaaaagaagtttgcgtcttgtcttcttccaaacacttgcctgggt
atcatggttcaaattatatcacgtcgcgaatcatctaaagttggtgtgacatgggataat
attaacaagaaaacatctgttgatgataatttcactcttgctacagcctttggtgtacta
attctcgactgtgtgatctatggaattttaacatggtacatagaaaatgtctttcctgga
gaatatggagtgccacggccactttattttccattccaaccatcttattggtgtggttcc
agaagtacttcccagtttggaagcttagaagaactaaaaggaaacaaggttcacccaaat
gctgactttgaagacgaacctgaagatttaaatattggtgtatctattaaagaattgcgg
aaagtttttgacagtgcagctggtaagaaagtagcagttgatgggctaagtttaaacatt
tataaaggacaaatcacagctttgctgggtcacaatggagctggaaaaacaacaacaatg
tctattctaactggtttgttttcaccaacttctggtgaagcaacaatcaatggtagaagt
atttacacagacatggatggcatacgagaaagccttggattatgtccacaacataacgtt
ctctttgatcgattaactgttaaagagcatttagagttcttttctgctttaaagaatgtt
ccaaaagcacaaggtaaaattgaaatagatcaaatgatcaatgacatacaacttaaagat
aaggccaatcaaatgtcatctactctgtctggtggtatgaaaagaaaattatgctgtgct
attgctttgcttggtggttcagaaactgttttccttgatgagccgacatctgggatggat
ccatatgcgagacgtgcaacttgggatttactgcagaaatacagagctaacaaaacaatt
atcttaacaactcattttatggacgaagcagatcatttaggtgatcgaattgcaatcatg
gccgatggtcaacttcgttgttgtggatcttctttatttctaaagaaaagatatggagtc
ggctatcatatgacattagttaaaggagataactttcaggagacaaaaacaagatctcta
atttctcagcatgtccccacatctaagatggttgggaatgttggaatggaaataagttac
attttggatgaggatagcacaaaacaatttaaagggttattcgaagtcctagaagaaaaa
aaggatgaatttggtatcagtagttttggtatatctgtcacaacattagaagaagttttt
ttaaaagtaggagaaggagagacacttggaattgaaaatgaagcaacagataatgatggt
gatgatgttgtgaagctgcataatatagatcgcactgagtccatgattgctcgtgatact
ttactaactggttttgcgttaaagactactcagttcaaagccatgtttattaaacgattt
ttaaattcaaaacgagaaaagaaggctttgattacgcaaatcgtacttcccttgttgctg
gttctcgttggtctactattatcaatgtcaggaaattctcaagatgatgacccaaaaaga
tttttaaatttaaacatgcttaatgtggagtcagaatcattaagtgcgttttttgctgat
acatcagcaaatgaaaactcatcgttggcctcaatggcaagtaaagtatatgatgctgca
ggcgtttcattgtttcgtgatatatctagtaatgtgaaatatatcaaagaagggaatagt
ggaaataacattgccttgtttattaattcatcgaatgagtatagccagaagatttctgct
gacaaaaaggaatgttgcaactacaaatacttgttattaaataagcaatgccaaaactat
ggtgataaatatagttcattgtgtgggacagagccaaaaacatttgcttataaaaattgt
atgaaatgtattgatgataaattagactgcgaagaaacaccaacgttagataaaataaaa
agcacaagcgatacaaggctatattttcaggaatatgttctagaagatagtggcaaaaat
ttgaaaagttattttaacgacaaagtggctggattaactctggagaataataaccaatac
acagtttggtacagtaaccaggcttggcacacgattgttgctgcatttagtgcagccagc
aatgttattgtgaaatttcataagaatgaaacatatggcattaagactaacaatttccct
ttacctaaaaacactaaagaaaagggtgaaagcatttcagctaatagtagcaacctgact
ttagtcatttttgttactatggcagcgtgttttgtcgcggcaagttttgtaacgttcatt
gtaacagaaaaaacttcgaaggctaaacacattcagttcgtgagtggagtggattcgatc
tcatattggggtgcatcatactgttgggacttcattaactttttgatacctggaattgga
attatcatcctttttgctgcttttaatctggatgaatatgagggagctctaggggaagtt
tttttgatcataattatgtttggtgtatccgttctaccattcgtctacgtcattagtttt
ttattttcaagtgctttgattggttatgctgtcatagctttgttgctgatggtgataagc
ttggctatggttcttgctgtgtttatcctgaaaagtactggtgaagaaaatgtagctgat
accttaaactacatgtttctaattctaccaacctatgcgttcccacaagcgcttactgat
ctagcaaccaatgttggattaaacagagcatgcacagtaaacccaaaagctataattggc
tgccaggttactggtcgaaattatgaagaaaatttgctagcatggaaatatcctggcatc
ggtgttcatttgttgtacatgtttgtcgaagctctgttttttttctttctcactctgctt
atcgaggaacgattctttttggggtcatgttgtggttcaaataatgcaaaaggtttttca
aaacgagaaggggaggatattgatgtccaagctgagagagaaagagtgttcaaaatgtcg
caagaggaaatagaaaagtctgctgtagtgctccaagatctcacgaaggtgtacagaaca
actggaatgactgctgttgatcatttaaattgtgccatacctaaagctgaatgttttggt
ctgctgggggttaatggcgctggaaagacaaccacattcggcatgttgacaggagaattg
ggtatcacggacggtactgctttcatgcatggttataacattcagacacagttaaatgac
gttcaacaaagaattggatactgtccacagttcgacgctttagttgaaagattgactggt
cgtgaaatgttgacaatgtttgcacgcttgcgtggaattccatctcatcttattgaggat
gttgtaaagtctgctatcgagcaattaaatcttggtaaatgggcagacaagttgtgtgga
gactacagtggtggtaacaaacgtaaactgagcactgcaatggctttagttggtgatcct
tctgttgtgtttttggacgagcctacgtcaggtatggatcctgcttccagaagattcttg
tgggacactttgacatctgtaatcaatacgggacgatcgattgtccttacatcacacagt
atggaagagtgcgaggctctatgtacacgtcttgttatcatggtgaatggacaatttaaa
tgtattggaagtatacagcatctgaaaagtagatttgggcaaggatatacaatcatgtta
aaaatatctaaaaataaaccaggagacccccagatggggagtgcgaacaatccaatgtac
aacgacgattcgtctaccttgcaagtaccgccacaaggggcattagcacaatcgtcatca
tcacaaaatattgctataaactctgaaagagttaaaacattcgttcatgaatcgtttcct
ggtgctgtacttgtagaggatagacagagtcttctgcagtatcaaattatcaatccaaat
ttgcgttggtctcatctatttggcactctggaaaaacacgctgaagaacttggtataata
gactacagtgtgagccagacatcgttagaacaagtcttcatcaacttcgcgaaaaatcaa
cattctgaagatcgaatctttaataaaaaattttgttcgtgcatgtgtttctaa
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integrated database retrieval system
