Hydractinia symbiolongicarpus: 130643117
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Entry
130643117 CDS
T09218
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130643117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsy03009
]
130643117
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
Pre-60S particles
GTPases
130643117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EF-G_D2
EFG_III
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
130643117
NCBI-ProteinID:
XP_057305551
LinkDB
All DBs
Position
1:16321821..16336624
Genome browser
AA seq
1116 aa
AA seq
DB search
MKTESIEFISSLQKNTSHIRNICILAHVDHGKTTLADCLIASNGIISSRLAGKLRYMDSR
EDEQKRGITMKSSAISLFYNLDLKNYLINLIDSPGHIDFSSEVSTAVRLCDGALVVVDVV
EGVCPQTNAVLRQAWLEGIKPCLVLNKVDRLITELRMSPIEAYYHLQKIMEQVNAVTGNL
FSAQVMEQSTKDENKENITLNEGESQVFDWSSGLDEADDENIYFSPAQGNVVFASAIDGW
AFGIDTFAKLYSEKLGISSNILLKTLWGDYFLNLKAKKIFKGAHVKGKKPLFVQFILQNI
WDVYEAVLLNRDKEKIDKIVASLKLKISARDSKYTDYRIHLHAILRQWLPLSDALLGMVC
KVLPSPLDIKEERVKNLMCSGFKKFESFSFETQQLKSDFLKCSSADEAPVIVFVSKMLSV
PTSVLPHNRARPLTKEELTARHEAVKQRIAERETHNENSTGDDVEQLTNTNAADTSEEAT
PTEEATKDGETFIAFARIFSGTLKKGSSLYVLGPKYDPSIELEEVSSMTNGENANDLGNQ
LLDKHMSRCTIEDLYLMMGREFELFDEVPAGNILGINGLGDHVLKSATVSTSLACPPFTP
MHLEAMPIVRVAVEPKQPSQLPFLISGMKLLNQADPCVQVLLQESGEYIIVAAGEVHLQR
CLDDLRQRYAKIQIRVSDPIVPFRETIVAPPKVDMVNEEITEENKVTAHYTQRLPAFMLK
EINVFSDTIHKGGELATVSQDDGEQANADGGTERLTKTQLSELRKSNKIKEKLGLIEALT
SNKQYCICLHAKPIPRDVIGCLESNAHLLKILQKIANENSADEKQKLLNNLTSTTRNEIQ
KFYDNLKTLFAASGKLWKGAADKIWSMGPKGTNNNLLLNNIKDYNRTNIWQGIINSSNAD
NTLREFDNSIVSGFQVAVQAGPMCEEPMMGVAFFVEEWNILEKVSSDETYAPLSGQYISA
VREGCRCAVMAQPMRLMAAMYSCEIQATSDVLGKMYGVLGKREGKILSEDLKEGSDIFQI
NAELPVAESFGFAEEIRKKTSGLASPQLVFNRWEVIDVDPFWIPITEEEYELYGEKADSE
NLALKYVNSVRKRKGLYIEKKTVEFAEKQRTLKKNK
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgaaagtattgagtttatttcatccctgcagaagaacacatcacatattaga
aatatatgtatcctggctcatgttgatcatggaaagacaactttagcagattgtctgata
gcaagcaatggcatcatatcaagtaggcttgctggaaagctcagatacatggatagtcga
gaagacgagcagaagagaggcattaccatgaaatcaagtgcaatttcacttttttataat
ttagatcttaagaactacttgatcaacttgatagattcaccaggacatatcgacttttct
agtgaggtatccacagctgtaaggttgtgtgatggtgcacttgttgttgttgacgtagtg
gaaggtgtctgtcctcagactaatgcagttttaagacaagcctggctagaaggtataaaa
ccttgcttagtcttgaacaaagtggatcgtttaatcacagaattaagaatgtctcccatc
gaagcatattatcatttgcagaagatcatggagcaggtgaatgcagtgactggtaatctg
ttcagtgctcaagtaatggagcaatctactaaagatgaaaataaagagaatattacctta
aatgaaggggaatctcaagtgtttgactggagttctggactagatgaagcagatgatgaa
aacatttatttctctcctgcacaaggaaatgtcgtatttgctagcgctattgatggctgg
gcttttggaattgacacattcgcaaaactgtattctgaaaagctaggcatttcttcaaac
attctactgaaaacgctttggggcgattactttctaaacttgaaagcaaagaagatattt
aaaggcgcacatgtgaagggaaagaaaccactgtttgttcagtttattttgcagaacata
tgggatgtctacgaagctgtgttgttaaacagggataaggagaaaattgataaaattgtt
gctagtttaaaattaaaaatttcagcacgtgattcaaagtatacagattatcgaatacac
ttgcacgccatcttgcgacagtggttgcctttatcagatgctttgttgggtatggtttgc
aaagtactgcccagtccccttgatataaaggaagaaagggtgaaaaacttgatgtgtagt
ggatttaaaaagtttgaatctttcagcttcgaaacacaacaactaaaatcagattttttg
aaatgttcttcagctgacgaagcacctgtcattgtatttgtttcaaaaatgttatcagtt
ccaaccagtgtattgccacacaatagagcaagacctctaacgaaagaagaattaacagct
cgtcatgaagctgtgaagcaaagaatcgcggagcgtgagacacataatgaaaactccacc
ggagatgatgtagagcaactgacaaatacaaatgcagctgacactagtgaggaagcaacc
cctacggaggaagctaccaaggatggtgaaacctttatagcgtttgcacgaatatttagt
ggcacgttgaaaaagggaagctcgctttatgtgttaggtccaaaatatgatccctcgatt
gaactcgaagaagtgtcatcgatgactaatggagagaatgcaaatgatttgggcaaccag
cttcttgataaacacatgtcaaggtgtacgatagaagatctttatttaatgatgggtcga
gaatttgagttgtttgatgaagttccagctggaaatatattaggtataaacggtttaggc
gatcatgttttaaaatctgcaacagtcagcacttctttagcttgtccaccatttacgccg
atgcatttagaagctatgccaatagtccgcgtggctgtggaaccgaagcaaccaagtcag
ctaccatttcttataagtggtatgaaactgttgaaccaagcggacccgtgtgtgcaagtg
ttattgcaagaatcaggcgaatacataatagtggctgcaggcgaggtacatttgcaaaga
tgtttggacgatttacgccaacgatacgcaaaaatacaaatacgcgtatcagatcctatc
gtgccgttccgtgaaacaatcgttgcgccccctaaagtcgatatggtgaatgaagaaata
accgaagagaataaagtcactgcgcattacacacaaaggctgccagcatttatgttaaaa
gagataaatgtttttagtgatactattcacaaaggaggagaacttgccaccgtttcacaa
gacgatggagaacaggcaaacgcagatggcggtacggagaggttgacaaaaacacagctc
tctgaacttcgtaaaagcaacaagataaaagagaaattaggactaatcgaagcgctgaca
tccaacaaacagtattgtatttgtttacacgcgaaaccaattcctcgagatgtgattggt
tgtttagaatcgaacgcgcatttgttgaaaattcttcaaaaaattgccaacgaaaactca
gcggacgagaaacagaaactgttaaataatttaacgtcgactaccagaaatgagatacaa
aaattttacgacaacttaaagacgttgttcgctgcgtctggaaagctatggaagggggct
gcggataagatttggtcaatgggtccgaagggaacgaataataacttgttattgaacaac
ataaaagattacaatcgaactaatatatggcagggaataataaactcatctaatgctgat
aacacattaagagaatttgataatagcattgttagtggttttcaagtggctgtccaggcg
ggcccgatgtgtgaggaacctatgatgggagtagccttttttgtggaagagtggaacatt
ttagaaaaagttagttccgatgaaacgtatgctccactttctggtcagtacatctcagcg
gtaagagaagggtgtcgatgtgctgtaatggcacagcccatgcgtcttatggcggccatg
tatagttgcgagattcaagctacttcagacgtgctcgggaaaatgtatggcgtgcttggc
aagcgagaaggcaaaatcttaagcgaagatttgaaagaaggttcggatattttccaaatc
aatgctgaattgccggtcgccgaaagctttgggtttgctgaagagatacgcaaaaagaca
agcggattggccagtccgcaattagtgtttaatagatgggaggtgattgacgttgatccg
ttctggatcccaataacggaagaggaatacgagttatatggtgaaaaagctgacagtgaa
aatctagctttaaagtatgtcaatagtgtacgaaaacgtaagggtctatacatcgagaaa
aaaactgtggaattcgctgaaaagcaaagaacactgaaaaagaataaataa
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