Hydractinia symbiolongicarpus: 130644221
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Entry
130644221 CDS
T09218
Name
(RefSeq) 3'-5' exoribonuclease 1-like
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130644221
03036 Chromosome and associated proteins [BR:
hsy03036
]
130644221
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130644221
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
130644221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SAP
Rv2179c-like
Pox_D5
KELAA
SAP_new25
Motif
Other DBs
NCBI-GeneID:
130644221
NCBI-ProteinID:
XP_057305720
LinkDB
All DBs
Position
5:3397331..3411846
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AA seq
291 aa
AA seq
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MSYDEHSAEAFGSPSHLNDLSDGKKVEREFSHPVYKKISAANGRINRMTLKNLEDALSYL
NLSTRGSKEILQKRLKAYVRKDNLKRDSVDDTAAPHYVDYYIVIDFEATCEEQNPPGYEH
EIIEFPAVLINADTYEVVAEFASYCRPVVHPTLSEFCKKLTGITQVQVDSAPLFETVLRR
FEEWLNQQIKPKETFCISTDGPWDIDRFLKQQCKRLNIQIPHYFHRWVNVRKHFYNYYKI
KQVNVELMLQHLGMEFEGRPHCGIDDSRNIARILIQLKKDGADMCINETFR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgatgagcacagtgcagaagcatttggaagcccatctcatctcaatgattta
agtgatggaaaaaaggtagaaagagaatttagtcaccctgtgtacaagaaaatatcagct
gcaaatgggcggatcaatcgaatgactttgaaaaacttagaagacgccttatcctaccta
aatttgtcaacaagaggatctaaagaaattctacaaaaacgtctgaaagcttacgtgaga
aaagacaacttgaaaagagacagtgtggatgacactgcagcaccgcattacgtagactac
tatatcgtgattgatttcgaagcgacatgtgaagagcaaaatccgcctggctatgaacat
gaaattatcgagtttcctgcagttcttatcaatgctgacacatacgaagttgtagctgaa
tttgcatcatattgtagaccagttgtccatccaactctttccgaattctgcaaaaaattg
actgggattacacaggttcaagttgacagcgcaccattgtttgaaactgttttacgtaga
tttgaagaatggttgaaccaacaaataaaacctaaggaaacattctgtattagcacggat
ggaccgtgggacatcgatcgttttttaaaacagcaatgcaagcgcttaaacattcaaatt
ccgcattattttcatcgctgggtgaacgtacgaaaacatttttacaattactacaagata
aaacaagtcaatgttgaactcatgttacagcatcttggaatggagtttgaagggcgtcct
cattgtggaattgatgactcacgcaacatagctcgtattttaattcaactgaaaaaagat
ggtgcagacatgtgcatcaatgagacgtttaggtaa
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