Hydractinia symbiolongicarpus: 130644288
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Entry
130644288 CDS
T09218
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130644288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130644288
03036 Chromosome and associated proteins [BR:
hsy03036
]
130644288
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130644288
Coactivators
SAGA/TFTC/STAGA complex
130644288
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130644288
STAGA complex
130644288
TFTC complex
130644288
SAGA complex
130644288
SLIK complex
130644288
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
CFAP251_N
DSE1_N
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_VPS8
PAC11
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SPT8
TRM82_WD
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_like
PROPPIN
WDR54
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_ACSF4
MGR3_mid
Motif
Other DBs
NCBI-GeneID:
130644288
NCBI-ProteinID:
XP_057305809
LinkDB
All DBs
Position
5:4722142..4726811
Genome browser
AA seq
627 aa
AA seq
DB search
MNKYLSSYKRKRTEEVNELVSWYKQQRSFSNRSQPSTSSGLGSLNALNITPWDYNLDANI
VIKTEKDLAIDTRDFDINIESEPQGSSVPPKEYFEMLGMDSMQTGGRNAVSYASMMTDAS
AYEEQYLSLKIFLAACNASYKRELSSILFPIFIHFYLDLIAKPDFPTAQSFYNKFHHDHE
EHEKEITQFISKITLVSQIVLYPSVNELRNNKINLKLSHSVYLYLLQHLRHGNYTLVLQT
LNRHFTVKTSNILSSSKSIGYLTDSDTEEDFTEKYFSTWSDAEQLTVKSLQNSIAELQKS
SKILKPSICLYSFVNAYHGLTCSTFSHNDEILAAGFEDSSVRLWNLMSKHKVDFSSAEDE
KSVESSNINTSKDCRVLRGHSGSVYQTEFLPDNHLLLSASQDKSVRLWNTDMRSCLVDYR
GHNHAVWDVSASPLGCYFMSASLDKTLRLWNTEYAFPLRIFAGHNESVDSVVFHPNGNYI
ASGSSDKSCRLWDLQTGQFVRVFVGHKAPIYTLAFTKDGKYLVSAGEDTSILVWDLSNGQ
LLNEIHGHTKTVYSLVFSSDSTMLASSGLDSTVKVWESETLLKKSGNLVFKNSHDVIGSY
DSNLANVTNLKFSSGNLILAAGVAKGK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatatctatcgagttataagcgcaagagaactgaagaagttaatgaattagtt
tcatggtataaacagcaacgatcattttcaaaccgaagtcaaccgagtacaagttctggt
ttgggatccttaaatgcattaaacataacaccttgggattataaccttgatgcaaatata
gttattaaaacagaaaaagatttagctattgatactcgagattttgatataaatattgaa
agtgaaccccaagggagcagtgttcctccaaaagaatattttgaaatgttaggaatggat
agtatgcagactggtggcagaaatgcagtgtcatatgcatctatgatgactgatgcaagt
gcttatgaagaacaatatctaagtctgaaaatatttctggctgcatgcaatgcttcatat
aaaagagaactgtcatccattttatttccaatatttatacatttttacctggatttaatt
gcaaaacctgattttcctacagcacaatctttctataataaatttcatcatgatcatgaa
gaacatgaaaaggaaattacacagttcatttcaaaaattacactagtttctcaaattgtg
ttatatccaagtgttaatgaacttcgaaacaataaaatcaacttgaagttgtcgcattct
gtttacttgtatttattgcagcatcttagacatgggaactacactttggttttgcaaact
ctaaacagacattttactgtgaaaacatcaaacattttatctagcagtaaatcaattggt
tacctaacagacagcgacacagaagaggatttcactgagaaatatttttccacttggagt
gatgcagaacaacttactgttaaaagcttgcaaaattctattgcagaacttcaaaaatct
tcaaagatcttaaaaccctcaatttgtttatattcttttgtaaatgcataccatgggctg
acatgctcaacgttttctcataatgatgaaattttagctgccggatttgaagattcctcc
gtgcgattatggaatttgatgtctaaacataaggtcgatttctcttcagctgaagatgaa
aagtcagtcgagagctcaaatattaatacatctaaagattgtcgtgtattaagaggacat
tctggatcggtataccaaactgaatttcttccagataatcaccttctattatctgcatct
caagataagtctgttcgtttgtggaatacagacatgcgcagttgtttagtcgattacaga
ggtcacaaccacgctgtgtgggatgtcagtgcaagtcctttgggatgttattttatgtct
gcatctttggataaaacgctgcgcctgtggaatacggagtacgcgtttccgctacgaata
tttgcaggtcataatgaaagcgtcgatagtgtagtctttcaccctaatggaaattacatt
gcttctggatcttcagataaatcctgtcggctgtgggatttacagacgggacaattcgta
cgcgtatttgttggacataaggcaccgatctacacgttggctttcacaaaggatggaaaa
tatctcgtttcagcaggagaagatacgagcatcttagtctgggatttgtcaaatggacag
ctacttaatgaaatacatggccacacaaaaactgtttatagtttggtctttagttcggat
agtacaatgttggcgtccagcggtttagactcaactgtaaaagtttgggaaagcgagact
ctacttaaaaagagcgggaatttagttttcaaaaacagtcatgatgttattggcagttat
gattcgaatcttgcgaacgtaacgaacttgaaattttcttctggtaatttaattttggca
gcaggagttgccaaaggaaaataa
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