Hydractinia symbiolongicarpus: 130644312
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Entry
130644312 CDS
T09218
Name
(RefSeq) WD repeat-containing protein 41-like
KO
K23610
WD repeat-containing protein 41
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130644312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130644312
Membrane trafficking [BR:
hsy04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
130644312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_Nup120_160
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
130644312
NCBI-ProteinID:
XP_057305846
LinkDB
All DBs
Position
1:complement(17727675..17739003)
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AA seq
449 aa
AA seq
DB search
MFRSLFGGGSSVEKKKRDERNVPEIEDDQPRNRFNEIQILNGHTDVIHSIIKIDENRVLS
TSHDKKGIVWDCETGDILCELVGHTRAISSAILIENYLDEQKSFCDVIVTASSDQTIRVW
ELTNGQCRKVIKEHQSTVKRFSVVLFEPMLILTAGQDICLWSHSFQLLSKFQRNSLDYVH
TFINAKTDRIVTATDQPHLIVYDIKNESDGSSHEEYVIKEFKRLPRHRESITSLVLISDA
MFASASMDGAIIVWTTHRLEPTRKFNHYETFMNTLDHTYPYAVQHIMIADQRYIFAAIGT
GFAVYDPMLDKCVAKILNAHHSQVTSMVLLDNGTYLATSSLDGTIRLWASPLPKTPEELA
KAQQAVTPMSKLVGRRIQDCRVFPIKLELVGMCLAHSSSVQSVIKCGKEGFISCGNDGMV
ILWKDSELSRRRRDEEFRKVLSKLGWLDH
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcagtctttttggcggtggttccagtgttgagaaaaaaaagcgtgatgagaga
aatgttccagaaatagaagatgaccagccgcgtaatcgttttaacgaaattcagattttg
aatggtcacacggatgttatacattccattataaaaattgacgaaaatagagttttgtcg
actagccatgataaaaaaggaattgtttgggattgtgagactggtgacatactatgtgag
ttggttggtcacacacgtgcgataagttctgcaatcctcatcgagaattatttggacgag
cagaaaagtttttgtgatgttattgtgactgcctcctctgatcaaacaattcgagtgtgg
gagttgacgaatggtcagtgtagaaaagtgattaaagaacatcaaagtactgttaagcgt
tttagtgtggtgttgttcgaaccaatgctcattctaacagctggtcaggatatttgttta
tggagtcattcatttcaattgttgtcgaagtttcaacgcaatagtcttgactatgtccac
accttcatcaacgcaaaaacggatcggatagttacagctacagatcagccacacctcatt
gtgtatgatattaagaatgagagtgatggaagttcacatgaagaatatgtgattaaagaa
ttcaaaaggctaccacgtcatcgtgaatcgataacctcgttggttcttatatcagacgcc
atgttcgcttcagcatcaatggatggcgctattattgtttggactacacatcgcctcgag
cccactagaaagttcaatcactatgaaacttttatgaatacactggaccatacctaccct
tatgctgttcaacatattatgattgcagaccagagatatatctttgctgcgataggtacc
ggctttgctgtgtacgaccccatgttagataaatgtgttgcgaaaattttgaacgcgcat
cattcacaagtgacatccatggttttacttgacaatggaacatatctggctacttcatcc
ctggatggtactatccgattgtgggcgtcacctctccctaagactccagaagagcttgcg
aaggcgcaacaggcggtaacgccaatgtcaaagttagttggaagaagaattcaagattgt
cgtgtgtttccaatcaaactcgagctggttggaatgtgtttggcccactccagctctgtc
cagtctgtgattaagtgtggaaaggaaggttttatttcgtgtgggaacgatggcatggtt
atactgtggaaagattcagaattatcgagaagacgaagagatgaagaatttcggaaagtt
ttatcgaaattaggatggcttgatcattag
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