Hydractinia symbiolongicarpus: 130644583
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Entry
130644583 CDS
T09218
Name
(RefSeq) synaptobrevin homolog YKT6-like
KO
K08516
synaptobrevin homolog YKT6
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04130
SNARE interactions in vesicular transport
hsy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130644583
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130644583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130644583
Membrane trafficking [BR:
hsy04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
130644583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
130644583
NCBI-ProteinID:
XP_057306229
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All DBs
Position
5:complement(8444750..8450441)
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AA seq
197 aa
AA seq
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MVKLFAIEIFYKGAKVQELKSAHELQSFGYFQRSSVKEFMDFTGRIIVERTTKNQRASVK
EKDYMCHVYVNQDGLSAVAISDTDYPNRVAFNMLNKLLEEFSSQVSMSQYTTADPSTYTF
TLCETFLEKYQNPSEADPMMRVQTELDETKIIVYNTIEQVLQRGEKLDDLVAKSDNLSMS
SRTFYKTAKKTNSCCSW
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagttatttgctatagaaatattttataaaggggcaaaagttcaagaattaaaa
tcagcacatgaattacaatcgtttggatattttcaaagatcaagtgtaaaagagttcatg
gattttacaggcagaattatagttgaaagaacaacaaaaaatcaaagagcttcagtaaaa
gagaaagattacatgtgtcatgtatatgtgaatcaagatggtttaagcgctgttgctata
tccgatacagactatccaaatagagtggcatttaatatgttaaataaacttctagaagag
ttttcttcacaagtatccatgtctcaatatacaacagctgatccaagcacctatacgttc
acactgtgcgaaacatttttggaaaaatatcagaatcctagtgaagctgatcctatgatg
agagtacaaacagaactagatgagacaaaaattatagtttacaacacaatcgagcaagtt
cttcaacgtggagagaaattagatgatctggttgctaagtccgataatttaagtatgtca
tccagaacgttttataaaacggcaaagaagacgaattcttgttgctcttggtag
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