Hydractinia symbiolongicarpus: 130644787
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Entry
130644787 CDS
T09218
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130644787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130644787
Spliceosome [BR:
hsy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130644787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
PRP4
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_EML
Beta-prop_Aladin
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_Vps41
WD40_like
Beta-prop_EIPR1
eIF2A
Ge1_WD40
Beta-prop_ACSF4
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
130644787
NCBI-ProteinID:
XP_057306503
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All DBs
Position
5:complement(11301718..11397844)
Genome browser
AA seq
585 aa
AA seq
DB search
MASVGNVEQVTDKKTHTISGSLSLRNRYKMSSSDEEDGPVVKKQRLFYGSLEDQERERLA
REEKERLAAEELLRAQGSETSESDSDVDEDGNKKKKKKKKKKEQAEDDESDEDSAINKAI
KAGNINISQGDTLEMNTDATAERQQELMAEFEKRKAKRSINVSTDDGMVKARLRELGHPI
CLFGEGPAQRRDRLRDLLSVFEQFLPGFSSQIDEDVKEEEEDKESSEVWYHEGPASLKVA
RLFIAEYSLPKARDRLVCIKANAKNAEAELAVKTQEIHRKARSLVNFCSQIGDSRPLSYC
QFSPDGKLLATASWSGLCKLWSVPDGNEVRILKGHNSRVGGVIFHPRSTIDLETSVTNLV
SCSADGVIQLWNLEDDVPLGNIEGHDERVTSIAYHPSGRFLGTTCFDKSWRLWDLEVQTE
VLHQEGHAGEVYKICFQNDGALAATAGFDARGLVWDLRTGRNIMALEGHLKKVLAIDFHQ
NGYQIVTGSEDQKCMVWDLRKQKCVYTIPAHNNLISHVKYCENSIVTASFDGLAKVWSSP
SWAPLKTLSGHEQKVTCVDVSNDGNYIVTASFDRTFKLWGPEFLI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgtaggcaatgttgaacaggttacagataaaaaaactcacactatttctggg
tccctgagtttaagaaatagatataaaatgtcttcctcagatgaagaagatggacctgta
gtcaaaaaacagagacttttttatggtagtcttgaagatcaggagcgagaacggcttgcg
cgtgaagaaaaggaacgtcttgctgcagaagaactactgcgtgcacaaggaagtgaaaca
agcgaaagtgatagtgatgtggatgaagacgggaataagaaaaagaagaaaaaaaagaag
aaaaaggaacaagctgaagatgatgaatctgatgaagactctgcaattaacaaggcaatc
aaagctggaaacattaatatctctcaaggtgatacactggaaatgaatacagatgcaacg
gcagaacgacagcaagaacttatggcagagtttgaaaagagaaaagctaagcgttcaata
aatgtgtccactgatgatgggatggttaaagctcgcttaagagaattaggacatccaatc
tgtctgtttggtgaaggacccgctcaaagaagagaccgtttaagagatttactttcagtc
tttgaacagtttttacctggcttctcatctcagattgatgaagacgttaaagaggaggaa
gaagataaagaatctagtgaagtatggtaccatgaaggccccgcctcccttaaagtagct
cgtttatttattgcagaatattcgctacctaaagccagagatagattagtttgcatcaaa
gccaatgctaaaaatgcagaagctgaattagctgtgaagacacaagaaattcatcgcaaa
gctcgctcgttagtcaatttttgcagtcagattggcgatagccgaccattgtcctattgt
caattttcacctgatggaaagcttttagctacagcttcgtggagtggactctgtaaatta
tggtctgtacctgatggaaacgaagttcggattttaaaaggtcacaatagcagagtggga
ggagtaattttccatccaagatccaccatagatttagaaacttctgttacaaatttagtt
tcgtgctcagcggatggagtcatacagctatggaacctggaggatgatgtacccctgggt
aatattgagggacacgatgaaagagtaactagtattgcataccatccttccggtaggttt
cttggtaccacttgttttgataaatcatggaggttgtgggatttggaagtgcagacagaa
gttctacaccaagaaggtcatgcaggagaagtttacaaaatttgttttcaaaatgatgga
gccttagctgcaacagcaggatttgatgccagggggttggtatgggatttacggactggt
cgaaatattatggcattagaaggacatttaaaaaaagtgctagctattgattttcatcag
aacggttatcagattgtcactggtagcgaagaccaaaaatgcatggtttgggatctgcgg
aaacaaaaatgcgtatatacaattccagctcataataacctcatctcccacgttaagtac
tgcgagaactccatagttacggcgtcatttgatggcttggctaaagtatggtcaagtcca
tcatgggcaccgttgaagactttgtcaggacacgaacagaaggttacttgtgttgatgta
tctaatgacggaaattacattgttactgcatcttttgatagaacatttaaattatgggga
ccagagtttttaatataa
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