Hydractinia symbiolongicarpus: 130644984 Help Entry 130644984         CDS       T09218                                  Name (RefSeq) huntingtin-like isoform X1   KO K04533   huntingtin Organism hsy  Hydractinia symbiolongicarpus Brite KEGG Orthology (KO) [BR:hsy00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hsy03019]     130644984    04131 Membrane trafficking [BR:hsy04131]     130644984    03029 Mitochondrial biogenesis [BR:hsy03029]     130644984 Messenger RNA biogenesis [BR:hsy03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      130644984 Membrane trafficking [BR:hsy04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     130644984 Mitochondrial biogenesis [BR:hsy03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     130644984 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Htt_N-HEAT Htt_C-HEAT Htt_N-HEAT_1 Htt_bridge HEAT HEAT_Maestro HEAT_GCN1 Cnd1 Syntaxin-18_N DUF3535 GNC1_N HEAT_2 Motif Other DBs NCBI-GeneID:  130644984 NCBI-ProteinID:  XP_057306790 LinkDB All DBs Position 5:complement(16265801..16329955) Genome browser AA seq 3068 aa AA seqDB search MADKIVKAFEALRSHYLQESTQALGHQPSSSDVAESPGALSRKKDASLSKRERINFCNVI ADFLPMQTVKDINEFPQLLTLAMELLLVCCDDGEGDVRLVAGECINRIMKAFLDSNIGRV QVELYKEIKKNGSPRSLRAALQRFGDTCHLIRAHKCRPYVANLLPCIVKIAKRNDDSVQE VLATMMLKLCPVLGNFMTELDIKILLKTFLPNLKSLSATTRRTAASILNSICQNSRKAVH FYSWLISMLLGMITPLTDDLPSHTILGVLLCFRNIVPHLSDVDNTHHTMKGSFGVKKSPF KLIDSKDRILEKKQFLQIYEVTMFCTKHVDHNVVTAALENLYQVLLCQAKPLLEILLSPS GIAPTITGQLATLTGERKNSSEPTEFGDSGIPPDLQSISSMSVSSDMLSEKVESMETSSI SEFALGESGQSLDSALYAAMPEIPALKVSQYEAKSTDEGTAGEPDRVNNNENVGDNGEEE EDDGLQLPRTYTQGSMVNIESEPVSFHRDHLGSTVSDIPDNVSQSSLDELYRFESVSSAD ICAVIERQFNFDAVTCIGVPILHCVRLMCSFLLNGKPGQLLPDSKTRVSVKSLALHCISA AIRLFPEALFAKVIPDDFIMNDAENVSSQLVRDIILFKDHSDPQIRGAIAGIIGHLISTI VQASNGELDEWNNRIAIIYDTENLSIHKLLQIIVKMFEDESAIAIKLSCFATKNFILPLS ESSYNVYAYDLAWSMLALANTSYWLVKVEIMEVFQRINYKLMSFLRQPWILFKELSKLNT KFVKLQYEVVNNVLVKLLGDEDARVRYNAALSCVKIIPNLHCTSTGKVYSHKCCMLDDVQ SYLEDETVSFGKKFNLKNKSILETNLSYVIRCVMKQQNCATSKFMNHGCVQCFFMLSEVY PISAFPYAWEVFPSYQLKKSPKNPRDRSTKLQPMRQLNFNLLHSSSYGLLNVTFNLISTS WMTLDLQAHQEGLKLCVHFICGAGLKQLHQKAAEATQEQKSEVDTIIGDCQWSSLEDAEL IVYAKKLFVHITRLLHVLTHVIEQTNPLANAAKLQLGFQNKDKTPLPGTVTASSPSSPQG VSSMQSTAPANSPRRFTLGKAMHKKQDTDTYLNTTGENTPTTETKTIGTPSTPSSGEKIE KLGIFQHIPHFMKLYEVAKGAFKNYQASSISTSLDKFVAFVRGILESLSLLLELATFNEL GPHAEEFLDYLKATARVEEESTFLAVQQLLKGLFGTNVASQPGVFRLAESTRHLVYTHGD PTFVYETSSEPSGVSFESFGMYDSCFLKSYHEVSDSLTLVPVVDSHSSTHDRSSRALSFI KNFKKNSTSHQRPTAKVSKERVSSIQSYIRLFEPLVIQALKAYTTTSSTQLQCQSIHLLD QLIRLRVNYSLLDSDQVFIGFVLKQFDFIENGQINNPELFVPTVFQFLVLLSYECYQPKF TQAKAIIGMPCIISKCDEVMACGQPAATHAIPALKPIVQDLFATQSQVRADTSKDLDTQR EVVVSMLLRVINFPEVLVMLTQVLNGSKSDSEKWKRLSRQIIDILLPSLSKLEINLCSME SLNSLHRLFDAVAPLSLRPADIILKALFNIHIPISDVEVVLALSMVVSLLRTLIMQNSED IIFSRIQQLDNAYIRLSFSLAPKEVDFALLTKKTEQTAAHYLSSFLVFMLRVSVEELVQS RQKLNSDKKIISVLKNLIETYFMLLSYVAKSGAFKKLSSNILSMLFTPMESTTQKDLSLL RSVTRKLLLLKYTDSVCFMKWLFMLQTMGVSDADFWKEFYLPEQTSQEEKHKWVDDFVSN GSLLLYCDIVVTKLKEQKNVDASLVNSLFKNNIESIIANINEIPVKELVSCILQNNDLTG LFIQSLSNLLSTNSFKYKPSILKPLLHQLECVDLAQSSSVVQLLFSFITHIKTYGLARRA ETLACRRMEYLQSLPEPEKDLPMDGIVSFSQKKLYINRYPRLCSLIQRLLKNNEAIPQLI SHPLDSTDVDLSKYKVDKGWMYTFVKSLCHSCNHSGSQSRSSVRLLRSLNLQDIQKIMED EKFDIHLLETCILEAKSSEKYTWSKGRAVTTIHNIGMELLSLYDTGGSSESENKDQLLKI TKTLVVKHISNIVEPLKDEIVFKSQTYTYYNEQKLSALFQNDKKIEKYFTLLKCVVRFLR LSCCYNQTWNLDMFNGYNIVFFVLVLPQLCTRNLQNKEDSLIHLEICFESLSLLLHCQEL SICLNAQPYSYLLMKTIDYVYAIVNQISIRCGDVLVKVEKLCLGYDEDRKSNKPIYEKDK SSFKRSCEQVAEMINALRTVLSLNSTTHANLPTFLVSPLRKVVTGMARIPFVNSYARIPP IVWKFGWEPTLEGLLYTELPPLPVDILKEKEVLQEFVFRVNHIGWTSRMQFEETWAALLG VLSSPPMLEDSSVEVEVEAAQASCLAVHCITSLLLDTTLAPVPGNSSFSQYSVIHRMRDY PFLGSKAGKKLSAIRSQIETVYQQPSTCVDNMKLRPNLCPVVPSLLSTRQRKQQLLYGCM MEEKLFVTNLELPCDFKQFNFGQISASAIRTRLVTSDVQEDTDSDDSDSLIIKVKEKSPV SGQPSDSYRKLDELDIRSCLQFLLELFEQWLSPFAVPKTPLMLKMEATKSLCVLSDLLLE LNHYEWMLGILLEFTQTHPVEDDVLMEYLVPTMCKASAVLKLEGNYAERICKQVEVSLKS PHVPLQISCLVGALYILESYISSTNILLTPILTEYITKKLTTLSDSSNYASQRFAVMLWS VSFFLVENCSSEIQDPHFATLVLETAILELCRATQSYAPCAYDVMFRGLERLAVSFSLTR PECDRLAKIASDCISSGSTKRIASALGLLCTCMYTGKDAEQASGLSTIDLVIDAPITDSR LVVMERINSLLTRIRKGELSDAVLLATILPRILLDFLPVQEVMNKLISEFLSSQQPRPEL IAKIFNKVSDLLYKEGEESLVRDWVFLCIGSFVQRTPQSMAIWSLSCFFISASTNPWLKS LFPFIVERKGKLEEQDREIFCISALDFYSNQNLEAVQKQQFMQTFRARADHPSSPYEKLI ACCMQSKT NT seq 9207 nt NT seq  +upstreamnt  +downstreamnt atggctgataaaattgtcaaagcctttgaagctctaagaagtcactatcttcaagaatct actcaggctcttggccatcagccatcatcaagtgatgtcgcagaaagcccaggggcattg tccagaaagaaagatgcatccttatctaagagagaaagaattaatttctgtaatgtcatt gcagactttctcccaatgcagactgtcaaagatataaatgaatttccacaattattaaca ttggcaatggagcttttacttgtgtgttgtgacgatggtgagggtgatgttcgtttagtt gcaggagaatgcattaataggattatgaaggcatttcttgattctaacattggacgggtt caagttgaattgtacaaagagataaaaaagaatggatcaccacgatcattgcgtgcagcc ttacaaagatttggtgatacctgtcacttaatacgagctcataaatgcagaccttatgtt gccaacttgctgccctgtatcgttaaaatagctaaacgaaatgatgactcggttcaagag gttttggccaccatgatgttgaaactgtgtcctgttcttggtaactttatgactgaatta gatattaagattttactgaaaacatttcttcctaatttaaaatcattgtctgctaccaca agaagaactgcagcatctattctgaattctatttgtcaaaattctcgaaaagcagtccat ttttacagctggttgatcagtatgcttcttggaatgattacacctctcacagatgacctt ccatctcacacaatactcggtgttttgctctgttttcgtaacattgtgccacacctgtca gatgttgataacacacatcataccatgaagggtagttttggtgttaaaaaatctcctttc aagctaattgactcaaaagatagaattctagaaaagaaacaatttttacagatttatgaa gttactatgttttgtacaaagcatgttgatcacaatgttgtcactgcagctcttgaaaat ttataccaagtactgttatgtcaagcaaaaccacttctggaaattcttttgtctccttct ggaattgctccgaccattactggccaacttgctacactaactggtgagagaaaaaactct tctgaacctactgaatttggtgattcaggaattccgcctgatttacaaagcatatcttcc atgtcagtcagttcggatatgctgtcagaaaaggtagaaagcatggaaacatcttctatt tctgaatttgctcttggtgagagtggccaatctcttgacagtgcactctatgctgcaatg cctgaaataccagctttaaaggtatcacagtatgaagcaaagtcaacagacgaaggaact gctggagaaccagatagggttaataacaatgaaaatgttggtgacaatggagaagaagaa gaagatgatggattacaactaccacgtacatacacccaaggaagcatggtaaacatagaa agtgaaccagtcagttttcatcgagaccatttgggaagtactgtaagtgatattccagac aatgttagccaatcaagtttagatgaactatatcgctttgaatcagtttccagtgctgat atctgtgctgtgattgaaagacaattcaattttgatgccgtgacttgtatcggagtgcca attttacattgtgttcggctgatgtgttcgtttttgctaaatggtaaacccggtcaactg cttcctgattcaaaaaccagagttagtgtaaagtctttagctttacactgcattagcgca gcaataaggttatttcctgaggctttgtttgccaaggttatacctgatgactttatcatg aatgatgcagaaaatgttagcagtcagttagttcgagatatcatcttatttaaagatcat tctgacccacaaatacgaggagctattgctggaattattggtcatttaatttctaccatt gttcaagcatctaatggagagcttgatgagtggaataaccgaattgctataatatatgac actgaaaatctgagtattcataaattgcttcagataattgtgaaaatgtttgaagatgag tctgcaattgcaatcaaactaagttgctttgcaacaaagaattttattttaccactttct gaaagttcttataatgtttacgcttatgatttggcatggagcatgcttgcgttggcaaat acgtcatactggttggtcaaggttgaaatcatggaagtgtttcaaagaattaattacaaa ttaatgtcttttttaagacaaccatggattctgtttaaagagctatcaaagcttaataca aaatttgttaaattacaatatgaagttgttaataatgttttggtgaagttgctgggagac gaagatgcgagagttcgttacaatgcagcactttcctgtgtcaaaattatacctaacctt cactgtacgtcaactggcaaggtttattctcataaatgttgtatgcttgatgacgtccaa tcatatcttgaagatgaaactgtgtcatttggaaagaaattcaatcttaaaaacaaatca atcttggaaacaaatttatcgtatgttatcagatgtgtcatgaagcaacagaactgtgcc acatcaaagtttatgaatcatggttgtgtgcaatgtttttttatgctgtccgaggtttat cctatttccgcatttccatatgcctgggaagtttttccaagttatcagttaaaaaagtct ccaaagaatccacgtgataggtcaacaaaattacaaccaatgcgtcaattgaattttaat cttctacatagcagttcttatggcttgttgaatgttacatttaatttaatatcaacttca tggatgacattggatcttcaagcacaccaggaaggtttaaagctttgtgtgcacttcatc tgtggtgcaggtttaaagcaattacatcaaaaagctgcagaagcaacacaagaacaaaaa tctgaagttgacactattattggtgattgtcaatggtcatcactggaagacgctgaactt attgtttatgctaaaaaattgtttgtacatataacaagattattgcatgttttaactcat gtaatagaacaaactaatccgttggcaaatgcagccaagcttcaactgggatttcaaaac aaagacaaaacaccattacctggcactgtcacagcatcatctccatcttcgccacaagga gtgtcatcaatgcaatctactgcacctgctaattctccccgcagattcacacttgggaaa gccatgcacaaaaaacaagatactgacacatatttaaacacgactggtgaaaatactccc accactgaaacaaaaacaattgggacaccatccacgccttcttctggtgaaaagattgaa aagcttggaatttttcagcatattccacattttatgaagctttatgaagttgcaaagggt gccttcaaaaattaccaagcttcatccatctcaacctctttagataaatttgttgcattt gtacgtggtattttagaatctcttagtttattgcttgagttagcaacatttaatgaactt gggcctcatgcagaagaatttcttgattacttaaaagctacagcacgtgttgaagaggag tcaacttttttggcagtacaacagcttcttaaaggtctatttggtacaaatgtggcaagc caaccaggtgtgtttagattagcagaaagtacacgacatttagtttacacacatggtgat cctacctttgtatatgagacatcttctgagccatctggtgtctcttttgaaagctttggt atgtatgacagctgcttcctaaaatcatatcatgaagtatctgattccttaacgttggta ccagtagttgattctcacagttcaactcatgaccgtagttcacgagcactcagctttatc aaaaactttaaaaagaacagtacatctcatcaacgtccaactgcaaaggtgtcaaaagaa cgggtatcttcaattcaatcatatatacgactatttgaaccactggtaattcaagcattg aaagcgtacacaacaacaagcagtactcaacttcaatgtcagtctatccatcttcttgat caattaatccgactgcgtgtcaactattctttgttggattccgatcaagtgtttattgga tttgtgttaaaacagtttgatttcattgaaaatggacaaatcaataaccctgagttgttt gttccaacagtgtttcaatttttggtcttattatcttacgagtgctaccaaccaaaattt acacaagcaaaagcaattattggaatgccttgcataataagcaaatgtgatgaagttatg gcttgtggacaacctgcagctactcatgcgattcctgcattaaagcccattgttcaggat ttgtttgcaacacaaagccaggtgcgagcagataccagtaaagacctggacacacaacgt gaagtagtggtgtcgatgctccttcgagttataaactttcctgaagtattagtgatgctg acacaagtgttaaatggttcaaaatcagacagtgaaaaatggaagcgactgtcacgacaa attattgatattctccttccaagtttatcaaagctagagattaacttgtgctcaatggaa agtttaaattcccttcatcgtctttttgatgcagttgcaccattgtcgcttcgtcctgct gatattattttgaaagctttatttaatatccacataccgatttcagatgttgaagtggta ttggccttgtcgatggtagtttcattactacgaactctaattatgcagaacagcgaagat attatattctccagaatacagcagcttgataatgcttatattcgtttaagtttttcactt gcaccaaaagaagtagattttgcactactgacaaagaagactgaacaaactgctgctcat tacctgtcttcatttttagtctttatgttacgagtatctgttgaagaattagtgcaaagt cgtcaaaaattaaatagtgacaaaaagataatctctgtattaaaaaacctcattgaaaca tattttatgttactttcatatgttgcaaaatcaggtgcattcaaaaagttatcctccaac attttatccatgttgttcacacctatggaatctacaacacaaaaggatttatccctttta aggagcgtaacaagaaaacttttacttctaaaatacactgattctgtttgcttcatgaag tggttatttatgttgcagacaatgggtgtatctgatgcagatttctggaaggagttctat ttaccagaacaaacttcccaagaggaaaaacataagtgggtggatgattttgtgagcaat ggatctttgttattgtattgtgatattgttgttaccaaacttaaggagcaaaaaaatgtt gatgcatcattggttaattcattatttaaaaataatattgaaagtattattgctaacatc aacgaaatacctgttaaagagttagtcagctgcattcttcagaacaatgatctcactggg ttatttattcaatctttatccaatttgctttcaacaaattcctttaaatacaagccatct attttaaaacctctattacaccagttggaatgtgtagaccttgctcagtcctcttcagtt gtgcagttacttttctcatttatcactcacataaaaacctatggattagcaaggcgggcc gagacgctggcttgtagaagaatggaatacttacagtctttaccagaaccagaaaaagat ttacctatggatggtattgtttctttttcccaaaagaaattatacattaataggtatcca cgactatgttcacttattcaaaggttattaaaaaataatgaagcaataccacaactgatt tcacatccgttagattcaacagacgttgatttatcaaagtataaagtagacaagggctgg atgtatacttttgttaaatctttgtgtcattcatgtaatcacagtggaagtcaatcaaga agttcagttcgtttactcagatcattaaatttgcaagatatacagaaaattatggaagat gagaagtttgatattcacttactggagacttgcattctggaagcaaaatcgtctgaaaaa tatacatggtcaaaaggaagagctgttaccacgatacataatattggaatggagctatta agtttgtatgatactggtggttcctctgagagcgagaacaaagatcaacttctgaagata accaagactttagttgtaaaacatattagcaacattgtggaacctttaaaagatgaaatc gtgtttaaatcacaaacctacacgtattacaacgaacaaaaactttcagcattatttcaa aatgataagaaaatagaaaagtatttcaccctgttaaaatgtgttgttcgttttcttcga ttatcgtgttgttacaatcagacctggaatctggacatgtttaatggctataacattgta ttcttcgtcttggtgttgccacaactctgcactcgtaatttacaaaataaagaagatagt cttatccatttggaaatttgttttgaatctctatcactgcttcttcattgccaagagtta tctatatgtttaaatgcacaaccatactcctacctactcatgaaaacaatagactatgtg tacgctattgtcaatcagatttccatacgttgtggtgatgtcttagtaaaggtggaaaaa ttgtgtctgggctatgatgaggatcgaaaatctaataaacccatttatgaaaaagataaa agctcatttaaaagaagttgtgagcaagttgcagaaatgataaatgctttacggacagta ctttccttgaatagcactactcatgcaaatcttcctacattcttagtcagtccactaagg aaagttgtaaccgggatggctagaataccatttgttaactcttatgccagaatacctcca attgtatggaagtttggctgggagccaactttggagggactgctatatactgagctacca ccattacctgtggatatattgaaagaaaaggaggttttgcaagaatttgtttttagagtt aatcacattgggtggacttcaagaatgcaattcgaagaaacgtgggcagctttgcttggt gtgttaagttcaccaccaatgttggaagacagttcagtagaggtagaggtggaagcagca caagctagttgtcttgcagttcactgcatcacttccctgttgttagatacaacattggct cctgtaccaggaaattcatcatttagccaatattctgttattcatcgtatgagagattat ccgttccttggaagcaaagctggtaaaaaattatcagctattcgcagtcagattgaaact gtgtatcaacaaccatcaacatgtgttgataatatgaagttaaggcccaatctgtgtcct gttgtacccagtcttctatccacgcgtcaaagaaagcagcagttactttatggatgcatg atggaagaaaaactttttgtgacaaatcttgaactgccatgtgactttaaacaattcaat ttcggacagatatcagcatctgctatccggacacgacttgtcacatcagatgtccaagaa gatacagacagtgatgacagtgattcattaattataaaagtgaaagaaaagtcacccgta tcaggccaaccaagtgattcgtatcgaaagcttgatgaattagatattaggtcatgttta caatttttactggaactatttgaacaatggctgtcaccatttgctgttcctaaaactcca ttgatgttaaagatggaagctactaaatctctctgcgtcctgtctgatcttctcttggag ttaaatcactatgaatggatgttgggtatcctactggaatttacgcaaacgcatccagtt gaagacgatgttttgatggagtatcttgtgccaaccatgtgtaaagcgtcagcagttctg aaactagaaggtaattatgctgaaagaatttgtaaacaagtggaagtttcattaaaaagt ccacatgtgccgttacagatatcatgtttagtaggagcattgtatatacttgagtcatac atcagttctacaaacatccttctcacgccaattcttacggaatacattacgaaaaaatta accacactctcagattcttcgaattatgccagtcaaagatttgcagttatgctgtggagc gtctcatttttcttagttgaaaattgttcatccgaaattcaagacccacattttgcaaca cttgttctcgagaccgccattttggagctgtgtagagctactcaaagttatgcgccatgt gcctatgacgtaatgtttcgaggtttggaacgcctagcggtctcattctcattaacgagg ccagaatgtgatcgcctggcgaaaattgcatccgattgcatatcgtctggctcaacgaag agaattgcgtcggctctcggtcttttatgtacttgtatgtatacaggtaaagatgctgaa caagccagtggactctccaccattgatctggtgattgacgcaccaatcacagactcgcgt ttagttgtaatggaacgaatcaattctcttcttacaaggattcgtaaaggcgaactttcg gacgccgtgttattagccaccattcttcctcgaatccttcttgattttctaccagtgcaa gaagttatgaacaaattgattagtgaattcttatccagtcagcaacccagacctgaatta atcgccaagatttttaacaaggtttctgatttattgtacaaagaaggcgaagagagcttg gtacgagattgggtgtttctatgcataggaagtttcgttcaaagaacaccacagtcgatg gccatatggagtttgtcatgttttttcataagcgcgtcgactaatccttggcttaaatca ttatttccattcattgtggaaagaaaaggaaagttagaagaacaagatcgagaaatattt tgtatttcagccttagatttttattccaatcagaatttggaagccgttcaaaaacaacaa ttcatgcaaacatttcgtgcgagagcagaccatccctcgtcgccgtatgaaaagttaatc gcttgttgtatgcaatcgaaaacatga

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