Hydractinia symbiolongicarpus: 130644986
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Entry
130644986 CDS
T09218
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsy03016
]
130644986
Enzymes [BR:
hsy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
130644986
Transfer RNA biogenesis [BR:
hsy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130644986
Prokaryotic type
130644986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
UPF0300
R3H
Motif
Other DBs
NCBI-GeneID:
130644986
NCBI-ProteinID:
XP_057306794
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All DBs
Position
5:16412837..16447848
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AA seq
632 aa
AA seq
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MDEEPCKKKLRLSVEIDADTNTTTEKEETECLIDIALDEKENVLDNVKKEDDKKKKHENE
IAVGVTCFINNSMKSYGIIKQRFSDFMVRECDLNGEPVYLTNMDHCDQDLKDTSENLSVV
DCPLSQETSEKIKNFSENEDKMKTLTLDVDNDKEHRKIVHKYIKDTFKSIETRTVSLEDN
SRAIILSFKSNKTNGSKRRFQPTKKVPKYCHFVLFKQNKDTIDCVNLLAKMLHTKSQLFS
YAGTKDRRATTIQRLCVQNMLSKRMQGLNSRLKNIVLGNFSYSQQGLSLGDLSGNEFTIV
IRNVLSEDKITKACLSLREKGFINYFGLQRFGTGAVPTHIIGKALLTEQYKEAVNMILTH
RHNEDNPQFGEHAAKKIWTETKDLESAKKAVKSNYSIEGKILESLSNQNKKNFLGAIQCI
PRNMRLLYLHSYQSFVWNKVVSKRIMDNGFQACVGDLVFNKEKSESNTRGFEDVLMLTEN
NIMSKDYNIFDIVLPLPGYDMKYPGNNMEEYYKILLQQDGLDLNNMRRKQKDFSLSGSYR
NIVVKPKNVKWKIINYSDFKISLIKNDYEKLTNTSPVVENKERGKFKALKLRMTLPPSSY
ATSALREVVDHEASYKTQVKLNETVDKKQTLV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccttgtaaaaagaaactaaggttatctgttgaaatagatgctgacacc
aatactaccaccgaaaaagaagaaactgaatgtttgattgacattgcgctagatgagaaa
gagaatgtgcttgacaatgttaagaaagaagatgataaaaaaaaaaagcatgaaaatgaa
attgctgttggtgtaacatgttttattaataacagcatgaaatcttatgggataataaaa
caaaggttttcagattttatggtccgtgaatgtgacttaaatggtgaacctgtttacttg
actaatatggatcattgtgatcaagatttgaaagatacatcagaaaatttgagtgttgta
gattgtcctttgtcacaagaaacatcagaaaaaataaaaaatttttctgaaaatgaagac
aagatgaaaacactgaccttggatgttgataatgacaaagaacacagaaaaattgttcac
aaatatattaaagatacatttaaaagtattgaaactagaacagtttcattggaggataat
tcacgggctattattctatccttcaaatccaacaaaactaatggaagtaagcgcagattt
caacctacaaaaaaagtacccaagtactgccattttgttttgtttaaacaaaacaaagat
acgatagattgtgttaacttgttggctaagatgcttcatacgaaatcacagttgttctcg
tatgctggaactaaagacaggagagcaactaccattcaaagattgtgtgttcaaaatatg
ctttcaaaacgcatgcaaggattaaactctaggctaaaaaatattgtgcttggtaacttc
tcatattcacaacaagggctgtctttaggagatctatctgggaatgagtttacaatagtc
atcagaaatgttttatcagaagataaaataactaaagcatgtttatctttaagagagaag
ggatttattaattatttcggtctccaaaggtttggtacaggtgcagtacctacacacata
atagggaaagctttattgacagagcagtataaagaagctgtaaatatgatcctcacacat
cgacataatgaagacaatccccaatttggagagcacgcagcgaaaaagatatggactgaa
acaaaggatttagaaagtgctaaaaaagctgttaaaagtaattattctattgaaggaaag
attctagaatctttatccaatcaaaataaaaaaaactttcttggtgcgatacaatgcatt
cctcggaatatgcgactgttgtatttacatagttatcaaagctttgtttggaataaagtg
gtttcaaagagaattatggataatggttttcaagcttgtgtgggagacttagtgttcaat
aaagaaaaaagtgagtccaatactcggggattcgaagatgtcttaatgctaactgaaaac
aatattatgtcgaaagattacaacatatttgatattgttcttcctttgcctggatatgac
atgaagtacccaggaaacaatatggaagagtattacaaaatattgttgcaacaagatggg
ctagacttaaataatatgagacgaaagcaaaaagatttttcactgtcaggatcgtacaga
aatattgtagttaaaccaaagaacgtcaaatggaaaataatcaactacagcgattttaaa
atttctctaattaaaaatgattatgaaaaacttaccaatacttctccagttgttgaaaac
aaggagaggggaaagtttaaggctttgaaattacggatgactttaccgccttcaagttat
gcaacgtcagcattaagagaagttgtcgaccatgaagcatcatataagacacaagtcaaa
ttaaatgaaacagttgacaagaaacaaacactagtttaa
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