Hydractinia symbiolongicarpus: 130645040
Help
Entry
130645040 CDS
T09218
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130645040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130645040
03012 Translation factors [BR:
hsy03012
]
130645040
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130645040
Translation factors [BR:
hsy03012
]
Eukaryotic type
Release factors
130645040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
130645040
NCBI-ProteinID:
XP_057306873
LinkDB
All DBs
Position
5:17592727..17653312
Genome browser
AA seq
442 aa
AA seq
DB search
MSLQNPDAESDRNVEIWKIKKLIKSLQAARGNGTSMISLIIPPKDQVSRIAKMLADEFGT
ASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTSEGKEKKVNIDFEPFK
PINTSLYLCDNKFHTEALTALLEDDNKFGFIVMDGNGSLFGTLCGNTRDVLHKFSVDLPK
KHGRGGQSALRFARLRMEKRHNYVRKVAETAVQMFITNDKVNCTGLVIAGSADFKSELSQ
SDMFDQRLQAKILKVVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDT
GKFCFGVDDTMKALEMGAVETLIVWENLDCQRIVLKNHNSEEDKILMLNTEQEKDRTHFL
DKETNVEMEVLDKISLIEWLANNYKTFGAHLEIVTDKSQEGSQFCRGFGGIGGLLRYKVD
FQSMEYDGLDDLDFYDDDEDIF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtctttacaaaatccagatgctgaatcagaccgcaatgtagagatatggaaaataaaa
aaattgataaaaagcttgcaagctgcgagaggaaatggaaccagtatgatttcgttaatc
attcctccaaaagatcaggtctctagaattgctaaaatgcttgctgatgaatttggtact
gcatctaatataaaaagcagagttaaccgattgtctgtccttggtgcaattacatctgtt
caacaaagactgaaattatataacaaagttcccccaaatggactagttgtatattgtggg
acaatcgtcacaagcgagggcaaagaaaaaaaagttaatattgattttgaaccttttaag
cctataaatacatccctgtatttatgtgacaataaatttcacactgaggcattaacagca
cttctagaagatgacaacaaatttggttttattgttatggatggtaatggttcattattt
ggaactttgtgtggaaatacaagagatgtacttcataaatttagcgttgatcttccaaaa
aaacatggtcgtggtggtcaatcagctcttcgttttgctcgccttagaatggaaaaacgt
cataattacgtccgtaaagttgccgaaactgctgtacagatgtttataactaatgataaa
gtcaattgcactggtcttgttatagctgggtcagctgacttcaaatcagaactcagtcag
tcagatatgtttgatcagagattacaagcaaaaatactaaaagtagttgatgtttcatat
ggtggtgaaaatggatttaatcaggctattgagttgtctgcagaagtcctctcaaatgtc
aaatttatacaagaaaaaaaattgattggacgatatttcgatgaaatatctcaagatact
ggaaaattctgctttggagttgatgacacaatgaaagctttggaaatgggagctgtggaa
actctgatagtctgggaaaatctagactgccaaaggatagtactaaaaaaccataactct
gaagaggataaaatactaatgttaaatacagaacaagagaaggacagaacgcactttctt
gacaaagagaccaatgtcgaaatggaagttctagataaaatttcattaattgaatggttg
gccaataattataaaacctttggcgcccacttagaaatagtgacagacaagtcgcaggaa
ggttctcaattctgtcgaggatttggtggaattggaggccttctaagatataaagttgat
tttcaatccatggagtacgatggattggatgatttagacttctatgacgacgatgaagat
attttttag
DBGET
integrated database retrieval system
