Hydractinia symbiolongicarpus: 130645315
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Entry
130645315 CDS
T09218
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130645315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130645315
Spliceosome [BR:
hsy03041
]
Complex C
Other components
Step II factors
130645315
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_Vps41
eIF2A
WD40_like
Motif
Other DBs
NCBI-GeneID:
130645315
NCBI-ProteinID:
XP_057307252
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Position
5:21416306..21426583
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AA seq
568 aa
AA seq
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MDALAAYGSDDEQETDQQSRKTSEDVASHLKGSVSLDTLKSKFQLDIAPIVQEKKYEKDV
QRHLVDPTTKELKYNVKYDDMFAPEIGPMNPYKTKQQLAKKNTLAGYVEEANFSKFQFDN
QQKTFTSYGYAMDPSSEGEKYIGDLEKLNENSGKTVFEATKKRPGDKRRREKPGDPEEID
GYLGPWAKFADEKTSAKPSEEQKVILDQYEEKKEKRGKKDEEKIEEKTKAHIEDLYDYQG
RPFLHIPNDSDTDFRSEDPPDKCFLPKKLMHTWSGHSKGVAAIRLFPKSGHLLLSASMDC
KIKIWEVYNKRRNIRTYHGHSKAVRDICFNNDGTKFLSCSYDRWIKLWDTETGECLGRYS
NKKIPYCVKFNPDEDKQDLFIAGMSDKKMITWDIRENEIVQEYDRHLGAVNTITFFDRNQ
RIATTSDDKSIRIWEWDIPVDSKLIQDPTMHSMPAATLSPNGKWLACQSLDNQILIYNVI
NRFRQNRKKSFKGHMNAGYACQVNFSPDMSYLISGDGDGKLNIWDWKTTKLYSKFKAHNE
VCIGCEWLPHETSKIVTCGWDGLIKLWD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgctagctgcgtacggttcagacgatgagcaagaaactgatcagcaatctaga
aaaacttctgaagatgttgcgtctcaccttaaaggttcagtgtcattagatacgttaaaa
tcaaaattccaattagatattgccccaatagttcaagagaaaaagtatgaaaaagatgtc
caaagacatttggtagacccaactacaaaagaactcaaatacaatgtcaaatatgatgac
atgtttgcacctgagattggcccaatgaatccatataaaactaaacaacagttggcgaag
aaaaatacactagctggttatgttgaagaagcaaactttagtaaatttcaatttgataat
caacagaagacatttactagttatgggtatgcaatggatccaagttcagaaggagaaaag
tatattggtgatcttgaaaagttaaatgaaaattcaggaaaaactgtgtttgaagcaaca
aagaaaaggcctggagataagcgtagacgtgaaaaaccaggtgaccctgaagaaattgat
ggatacttaggtccatgggcaaagtttgctgacgaaaagacatctgcaaaaccttcagag
gaacaaaaggttatactcgatcagtatgaagagaagaaggaaaaacgaggcaagaaggac
gaggaaaagattgaagagaaaacaaaagcacacattgaggatctatatgattatcaaggc
cgtccgtttcttcatatacctaacgactcggatacagactttcgttccgaagatccgcca
gataaatgttttctcccaaagaagcttatgcacacgtggtctggtcactcaaagggtgtg
gcagccatcagattatttcccaaatctggtcacttgcttctttcagcgagcatggattgc
aaaattaagatatgggaagtttacaataagcgtagaaacatccgaacctaccatggccat
tccaaagcagtacgggatatatgttttaataatgatggaacgaaatttttaagttgtagt
tacgatagatggattaagttatgggacactgaaactggtgaatgtttaggcagatattcc
aacaaaaagataccttactgcgtcaagttcaatcctgatgaggataagcaagacttattt
attgctggtatgtcagataaaaaaatgataacgtgggatatcagagagaatgaaattgtt
caagaatacgacagacatctgggcgcagtgaataccatcaccttttttgacagaaaccaa
agaatagctacaacttcagatgataaaagcattcgaatatgggaatgggatattcctgtt
gattcgaagttgatacaagatcccacaatgcactccatgcccgctgccacgctttcaccc
aatggcaaatggcttgcctgtcaatccttggacaatcaaatattaatttacaatgttatc
aatcgatttcgtcaaaacagaaaaaaatcttttaaaggacacatgaatgctggttacgcg
tgccaagtaaacttttcaccagacatgagttatttgatttccggtgatggagatggcaag
ttgaacatttgggattggaaaacaacaaaattatatagtaagttcaaagcgcacaacgag
gtatgtattggttgtgagtggcttccacacgaaacgtcgaagattgtgacctgtggctgg
gatggactaatcaaattgtgggactaa
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