Hydractinia symbiolongicarpus: 130645337
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Entry
130645337 CDS
T09218
Name
(RefSeq) nucleolysin TIAR-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130645337
03041 Spliceosome [BR:
hsy03041
]
130645337
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130645337
Spliceosome [BR:
hsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130645337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_7
RRM_5
RRM_PARP14_3
Calcipressin
TFIIA
VPS9
Motif
Other DBs
NCBI-GeneID:
130645337
NCBI-ProteinID:
XP_057307287
LinkDB
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Position
5:21681814..21688646
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AA seq
416 aa
AA seq
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MEPSDVPDSNATVLYVGNLDKRVTDQMMLNILRTGLQHIKDKIHSASMFPPTDMNSMEGY
CFVQFEDNNSACQAMTFLNGREFCGKKVKVNWATNSGTGGVPKVIGTSVAIYVGNLDDDI
NENDLKAAFEVFGEILNVKVVRDPATNRSKNIGFISFTNKPDAEKAIRDMHGAMLRGRAI
KTNWATRNQNQKKEELDYDEVYSSTSSENCTVYVGGIPNNVSDDVVRRHFEDYGKIVDLR
IFAAKNYAFIKFESHAAAATAICKTNGTELNGSCLKCWWGKEGPDSGSSGGHSNYSNNSS
HSNYSHSNSSDSSHSYNQSNMTPQQQQQYMQYMYNNPYYQQQYYQYWMQQYQMQMQNMQN
TQGGAAGAAGQQQPAGYQYQGYQQQQPGGNAGYGQQQQQQNPQQGGAGFPPQSYQN
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagccaagcgatgtcccagattcaaatgcaacagtcctatatgtaggaaatttagac
aagagagttacagaccaaatgatgttaaatatattacgaactggactacaacatataaaa
gacaaaatacattcagctagcatgtttcctccaactgacatgaatagtatggagggatat
tgttttgtacagtttgaggataataattctgcatgccaagcaatgacgtttctaaatggt
agagagttttgtggaaagaaagtcaaagtgaattgggctacaaactctggaactgggggt
gttccaaaagtcattggaactagtgtagcaatatatgttggaaacttagatgatgatata
aatgaaaacgatttgaaggcagcatttgaagtttttggtgaaatactaaatgttaaagta
gtacgtgatcctgcaacaaacaggagtaaaaatattggttttatctctttcacaaataaa
ccagatgcagaaaaggctattagagatatgcatggcgctatgctaaggggacgtgcaatt
aaaacgaattgggctactcgtaaccaaaaccagaaaaaagaggaactagattatgatgaa
gtatatagctcaactagttctgaaaactgcactgtatacgtgggcggaataccaaataat
gtatcagatgatgttgtcagaagacattttgaggattatggaaaaattgtagatctgcgc
atattcgctgctaaaaactatgcttttataaaattcgaaagtcacgcggctgcagcaact
gcgatatgcaaaaccaatggcactgaactgaatggatcttgtttaaaatgttggtggggt
aaagaaggaccagactctggcagttctggaggacacagcaactattcaaataattcatca
catagcaactacagtcacagtaactcaagtgattcgtcgcattcatacaaccaatcaaac
atgactccacagcaacaacagcaatatatgcagtacatgtacaataacccatattatcaa
caacagtattaccagtactggatgcaacaataccaaatgcaaatgcaaaacatgcagaac
acccaaggtggagctgcaggcgctgcagggcaacaacagccagcaggataccagtatcaa
ggttaccagcaacaacaaccaggtggaaacgctggatacggacaacaacaacagcaacaa
aatcctcagcaagggggcgcaggatttccgccacagagttatcaaaattga
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