Hydractinia symbiolongicarpus: 130645438
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Entry
130645438 CDS
T09218
Name
(RefSeq) polycomb protein Scm-like isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130645438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsy03036
]
130645438
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
130645438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
HMG_box
SAM_1
SAM_2
SAM_PNT
HMG_box_2
DUF1493
Motif
Other DBs
NCBI-GeneID:
130645438
NCBI-ProteinID:
XP_057307410
LinkDB
All DBs
Position
5:complement(22827045..22839391)
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AA seq
954 aa
AA seq
DB search
MSDKTVNVPSTPQTEEVLSEEITNKEETEKQSIAEHEESEPHESVIDYAKNTVNSFLSMY
GYDERVTTESLSNIKSEPISPSKDYAQVTSEASNSTIRTEDKVAILSKTATVTPLRNCSS
TSTKVDSESILVGVNSTRNLDGAPRKPITPYMRYRNMIFQEIKHKYPGCSPYDLACLISS
KWSMLTDSERQVWEEQYEEDMKKYNENLKTYYAHPNLKRDWMQEKKTPAHLLSFVENISL
RIEPQSPAQTRANTQEESRYNGRSGLCNWCKHFASLQEFSSVLEGREIYCSGLCSEKCFI
EAAQQICSVESGNNKVRYIGSDLPHEEPLNQVQPIASVTSSSSHSSSSSSSFNWDVYLAE
TNATVAPWTYFNHSRNPPANNFTVGMKLESCSHSKATNVKSLATVKEVCGARILLHFDGT
HSNLDVWKLCDSADIFPAGWREGSKLRAPIGYKFEEKHYGKFYSASLQNATIAPSNLFHK
EPTGPLENYFSIGMKLEAVVKQTPHIIRVATVVDVDRHEIKIEFAGYKGVGYWCGYKCRD
IFPAGWCLRTGHPLQPPGTKVDRLHLISSRESSTPPLESTSSGNRSQSGSPFQTTSVAPQ
RETTWKDKAASTNNVEVFINRDCYCGPYLEAQKLFALPKVYRGNIVKVLKNVLEDTIKCA
SDSKTVFGFLKPGRGNCVITAACDGVTYQCCLNNIDRVSKFWTVLEQFSDNLRCCQNLFS
STKFFSACSRCVSTHSSLGPGKRSSSNLYGYSSHSGDVARGNRGESSSASFDNYYKSSPR
SERGGYVTPAYSVYSSSRLENELARMQPINLSRHDSVFERTRPEVVMETKEGQNSLIESG
RRDSYLDPEKEDVNVDGLDDTEPVLKKKKVTNMAGGVEISSAPKTWSIDDVTAFLQQTDL
KDYIEKFKENEIDGKALLLLQRDLILTHMGFKLGPAVKLLDLIAELRTAQEKYS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaaacagtaaatgtaccatctacaccacaaacagaggaggtattaagtgaa
gaaataacaaataaagaggaaacagaaaagcaaagtattgcagaacatgaagaatcagaa
cctcatgaatctgtcattgattatgccaagaacacagtcaacagttttttaagtatgtat
ggttatgatgaaagggtgaccactgagtctttgtcaaatattaaaagcgaacctatctct
ccatcaaaagattatgcacaagtaacatcagaggcatctaattcaaccatcagaacagaa
gataaggtggcaatactatctaaaactgctacagtaacaccattacgaaactgctcatcc
acttcaacaaaggtagattcggaaagtattcttgttggagttaattcaacaaggaatctg
gatggtgctccccgaaaacccattacaccctacatgagatatcgaaatatgatctttcag
gaaatcaaacacaaatatcctgggtgctctccgtacgatttagcctgcttaattagcagc
aagtggagtatgcttactgactcagaaagacaggtttgggaggaacaatatgaagaggat
atgaaaaaatacaatgaaaatttaaaaacgtattatgcacatcccaatttaaaacgagac
tggatgcaggaaaagaaaacaccggctcacttgttatcgtttgttgaaaatatatctttg
agaatagaacctcaatctcctgcacaaaccagggcgaatactcaagaagaatcaagatac
aatggccgctcaggcttatgcaattggtgcaaacattttgcttccctgcaagagttttca
tcagtattggaggggagagagatatattgcagtgggttatgctcggaaaaatgtttcatt
gaggctgcacagcagatttgcagtgtggaaagtggaaacaacaaagttcgttacattggt
agtgatctaccccacgaggaacctctaaaccaagtgcaaccgatagcgtctgtaacttca
tcgagttcacattcgtcgtcgtcatcgtcatcatttaactgggatgtgtatctagcagaa
acaaatgcaactgttgctccatggacgtacttcaatcactcacgaaaccctcctgccaat
aactttaccgttggcatgaaactggaaagctgcagtcattctaaagctacaaatgtcaaa
agccttgccactgtcaaagaagtgtgtggtgcaagaattttgctgcattttgatggcact
cactctaacttggatgtttggaagttatgcgattcagctgacatatttcctgcaggttgg
cgagaaggatcaaaattaagagcaccaatcggatacaagttcgaagaaaagcattatggt
aaattttattccgccagcttgcaaaacgccactattgctccttccaacttgtttcacaag
gaaccaacaggtcctctagaaaattacttcagtatcggtatgaaactagaagcagttgtg
aaacagactccgcacataatacgcgttgcaacagtggttgatgtcgatcgccacgaaatt
aaaatcgaatttgctggatacaagggtgttggatattggtgcggttataaatgtcgtgat
atatttccagctggatggtgtttgcgtacgggtcaccctttacagccaccaggaaccaaa
gtagaccgtcttcatttgatttcctcgcgggaatcatctacaccaccactggagagcact
tcaagtggcaacagaagccagtccggcagtcctttccaaaccacatcagtagctccccaa
agagaaactacttggaaagacaaagctgcttcaactaataacgtggaagttttcatcaat
agagattgttactgtgggccttatttggaagcacaaaagttgttcgcgttgccgaaagtc
taccgtggaaatatcgtgaaagttttaaaaaatgttctggaagatacaattaagtgtgct
tccgattcaaaaactgtttttggttttctaaagccagggcgaggaaattgcgtaatcaca
gcagcatgcgacggagtgacgtatcagtgctgtttgaacaatatagaccgtgtatcaaaa
ttctggaccgtgttggaacagttttcagataacttgagatgttgtcagaacttattttca
agcactaaatttttttcagcatgcagcagatgtgtttccactcatagttctctcggtccc
ggcaagaggtcaagcagtaacttgtacgggtattcatcccatagtggtgatgttgctaga
ggtaatcgaggcgaatcgtcttcggcaagttttgataattattacaaaagctcaccgaga
tcagagagaggaggatacgttactcctgcttattctgtgtatagttcatccagattggaa
aatgaactcgcgagaatgcagccaataaatttatcgaggcatgattcggtgtttgaacga
acaagacctgaggttgttatggaaacgaaagaggggcagaatagtttgatcgagtcaggt
aggcgagactcttatttggatccggagaaagaagatgtgaatgtcgatggcttggacgac
acggagcctgtcttaaagaagaaaaaagtaacaaatatggctggtggagttgaaatctca
tccgcgccaaaaacgtggagcatcgatgacgtcactgctttccttcaacaaacagaccta
aaagattacatcgagaagtttaaagaaaacgaaatagatggcaaagcattactgttgttg
caacgcgacttaattcttactcacatgggattcaagcttggtccagctgttaaactatta
gatttaattgcggagttaagaactgcgcaagagaagtattcatga
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