Hydractinia symbiolongicarpus: 130645453
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Entry
130645453 CDS
T09218
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130645453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130645453
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
hsy04031
]
130645453
Membrane trafficking [BR:
hsy04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
130645453
GTP-binding proteins [BR:
hsy04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
130645453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
SRPRB
TniB
AAA_22
Motif
Other DBs
NCBI-GeneID:
130645453
NCBI-ProteinID:
XP_057307431
LinkDB
All DBs
Position
5:22974116..22981627
Genome browser
AA seq
250 aa
AA seq
DB search
MIYKDIVKGNYTVHTLGIRRWKIVYFEMADKKRFEPNYFYQFRVILIGDSTVGKSSLLRQ
FTEGQFIQSSDPTVGVDFHVRIIELSDKVHVKLQLWDTAGQERFRSITRSYYRNCAGCFI
VYDITHRESFDHARDWLQEAKYATEDQNIVYVLVGHKVDLDYQREVSTSEGEAFAHAHGM
VFIETSAKVTCNVEEAFILVAQEIYSRLEQGQITQKDGWDGVKTVPFRPGNIYLSQETLN
EKQTPKKCCR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgatctataaggatattgtgaagggcaactatactgtgcatactctgggtataagaaga
tggaaaattgtgtattttgagatggctgacaaaaaaagatttgaaccaaattatttttat
cagttccgagttattttaataggtgacagtactgtgggaaagtcatcattgttgcgtcaa
tttacagaaggacagtttatccaatcatcagatcctacagttggtgttgactttcatgtc
agaattatcgagttaagtgacaaagtgcatgtaaaacttcaattgtgggacacagcaggt
caagaaagatttcgttctataactcgttcatattatcggaactgtgcaggctgtttcatt
gtttacgacattacgcatcgcgagtcattcgatcatgcaagagactggttgcaggaagcc
aagtatgctacagaagatcaaaatattgtttatgtacttgtaggtcataaggttgattta
gattatcaacgcgaagtctctacgtcagagggtgaggcctttgcacatgcgcacggaatg
gttttcattgaaacttcagctaaagtgacatgtaatgttgaggaggcatttatattagtt
gcgcaagagatttattcaaggctagaacagggccaaataacgcagaaagatggatgggac
ggcgtgaagacagttccatttagaccaggaaatatatatctatcacaggagacgttaaac
gaaaaacaaactcctaagaagtgctgtcgataa
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