Hydractinia symbiolongicarpus: 130645482
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Entry
130645482 CDS
T09218
Name
(RefSeq) lamin-B2-like
KO
K07611
lamin B
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130645482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsy04812
]
130645482
Cytoskeleton proteins [BR:
hsy04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
130645482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LTD
Filament
Motif
Other DBs
NCBI-GeneID:
130645482
NCBI-ProteinID:
XP_057307471
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All DBs
Position
1:complement(19921865..19944929)
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AA seq
702 aa
AA seq
DB search
MQKKSAGMDPVQFKMAQQVTVDKDQVYYNRDVNFELSELNNRLARYISHVACLEKQNNKL
ALEITTLTENEFSKLKNFYESKLTEQSFQIKSCEKTIASLRLKIAEITEMLAKEKVSRSQ
LEEELIETKNKAETWVVSINTRNRELELELIDARNMEKTLKEKMERADHLHAMRIQQYQE
TRVRIEADSGYQNINALLNEKVEEWRKQYAVEIGTMRVELEETYKEKLNTLRMEIEEKHK
MYSQLEENYTLMKSLFQKEIIAYKSLLEGEEHRLKLMSSSECATNRYHISYTKPDNIIEV
IESDSEGRYVKLSNTSDQSIQLKGWKLYRVADDKEKVEFTFPKYSLEKGCYTTVFSASHG
KKTFALKDQEWPQGRTVITTVVNEKGEVITTHNMLKENVTSSHADAEHRTGAFLLNISAP
PVKGGHECEQRCLKQYRVDYKGPSVASNLAGVEITECNLDGEHVKLYNASSNDICLDSWI
LQQTVNEDDCMVIETQLQDVIKTGQSLKVKCKKLMDVQKVVTRLINQEKKVVAEHILQMS
AVAGLQQDVNADKRESGCIMLDVSGMQGCAMQQRMKLQYMTETLFSKTLGNIAITDCDEK
GKYVQLSNQSEEDEELEGCYITRVVERNAEEAVKYTFARGYVLKAGKSVKVWGSNQKKYL
PDHLVLKHCDWPNGKNCITTLYSCDKNIIAQHSMATVSTELQ
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaaagcgcgggaatggatccggtacaattcaaaatggcgcaacaagttact
gtagataaagatcaggtttactacaatcgagatgttaattttgaattgtcagagctaaat
aaccgactagctagatacatcagccacgtggcttgtctggaaaagcagaataacaaactg
gctcttgaaattacaacgttgacggaaaacgagttctcaaagttgaaaaatttttacgaa
agcaaattaactgagcaaagctttcagattaaaagctgcgagaaaacaattgcttcgttg
agactgaagattgcggagataacggaaatgttagcaaaagagaaggtgagtcgaagtcag
ctggaagaagaattaatagaaacgaaaaacaaagctgaaacctgggtagtaagtataaac
actcgaaatagggaactcgaacttgaattaatagatgcgcggaatatggagaaaacattg
aaagagaagatggagagagctgatcacttacatgctatgcgtattcaacagtaccaggaa
acaagggtgaggatagaagctgatagtggttaccaaaacatcaatgcattgcttaacgag
aaggttgaagaatggcgcaaacaatatgctgttgagattggcacaatgagggttgaattg
gaagaaacatacaaagagaagttaaacacactgaggatggagattgaagaaaaacataaa
atgtattcacaactggaggaaaattacacgctgatgaaaagtttgtttcagaaagaaatt
attgcttataaaagcttacttgaaggggaagagcacagattaaagttaatgtcgtcttct
gaatgtgctacgaatcgatatcatatttcatacacaaagcctgacaacatcattgaagta
atagagagtgattctgagggcagatatgtgaagctgtctaacacaagcgatcagtctatt
caattgaaaggttggaaactttatagagttgctgatgataaagaaaaagttgaatttact
tttccgaaatacagcctcgaaaaaggatgttataccacagtattcagtgcttcccacggt
aaaaagacgtttgcattgaaagaccaggaatggccacaaggaagaactgtaataacaaca
gttgtaaatgagaaaggagaggttattactacacacaacatgttgaaagagaacgtgaca
tcaagtcatgctgatgcggagcatagaactggtgcttttttgttgaacatcagcgctcct
ccagtgaaaggagggcacgagtgtgaacaacgttgtttgaagcagtaccgagttgactac
aaaggtcccagcgttgctagtaatttggcaggtgttgagataacagaatgtaatctggat
ggtgaacatgtcaagttgtacaacgcttcctccaacgatatatgtttggatagctggatt
cttcagcaaactgtaaacgaagatgactgtatggttatcgaaacacagcttcaggatgtg
atcaaaacaggccagtcattaaaggtaaaatgtaaaaaacttatggacgtacagaaagtt
gtgacaagacttatcaatcaagagaagaaggtagttgctgaacatattctgcagatgtca
gccgtagctggacttcaacaggatgtgaacgctgacaaaagagaatcagggtgtattatg
ttggatgtaagcggaatgcaaggttgcgcaatgcaacaacgtatgaagcttcaatacatg
acagaaacattgtttagcaagacacttggaaacattgccattactgattgtgatgaaaaa
ggaaaatacgtacaactgtcaaatcaatccgaagaggacgaagagctcgaaggttgttat
ataacacgagttgtagaaagaaatgcagaagaagctgtgaagtacacgtttgctcgtgga
tatgttctcaaggccggaaaaagtgttaaggtttggggatcgaatcaaaagaaatacctg
cctgaccatcttgtattgaaacattgtgactggcccaatggaaagaactgtatcacaacc
ctatatagctgcgataaaaatattattgcgcaacacagcatggcaaccgtctctactgag
ttgcagtag
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