Hydractinia symbiolongicarpus: 130645567
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Entry
130645567 CDS
T09218
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04140
Autophagy - animal
hsy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130645567
04148 Efferocytosis
130645567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130645567
Membrane trafficking [BR:
hsy04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130645567
Hops complex
130645567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_PEP5_VPS11
PEP5_VPS11_N
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_2
zf-rbx1
Beta-prop_EML_2
Beta-prop_IFT140_1st
zf-RING_5
zf-C3HC4
TPR_11
Beta-prop_RIG_2nd
zf-C3H2C3
Beta-prop_HPS5
zf-RING-like
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
130645567
NCBI-ProteinID:
XP_057307579
LinkDB
All DBs
Position
5:complement(24523423..24543623)
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AA seq
960 aa
AA seq
DB search
MSEVRDPSTWNKNAMAFSQWRKFNFFERELLKDPSTEESFGQLKGLLVNASASGRGQILF
GDSNGVLHCLNRDLRLTSFKIYELNVSHLFQLKQHSILVSVGQDEEGINPMVKVWNFDKL
DKVGNAMCVRMFRALVGNKAVQVSCIAVHENLSQMAIGFEDGTVIIIKGDVTNARHSKQR
TIHEDKYPITGLAYKQLGSKIILFVTTTETVMSFNLTAKDHKELLDEFGTGLNCSAISDV
SQENQFVIANYDALYFYHPESRGPCLAFEGDKKMVGWFRGYLIVVSKEMKQLPRSAGTGL
GMNILSIYDVDNKFIAYSGPFPDIMAVLGEWGLLHVVTVDGKIFQLEEKDTQTKLETLFR
KNMYDMAINLAKSQHYSDGLIEIFRQYGDHLYSKGNHDGAIQQYIRTIGHLEPSYVIRKF
LDAQRIHNLTEYLQALHEKGLANTDHTTLLLNCYTKLKAVDKLNGFIQTDSELNFDVETA
IKVCRQAGYFQHALELSEKYEQHDWYLRIQLEDIKDYRKALKYMKRLAFLEAESNLKTYG
KTLVNNVPDETTELLKQLCTDYQPTETKKKEKLQDVTPEPELSATSALVSGTIIMNPVPR
REILRSHPDDFIHIFVHQKPKLKEFLEHMVKMRNDCSNVTYNTLLELYLYDAAAAVASKD
FKKGADEESKALDLLLNTESKYDVDHAMVLAQMHNFKRGILFLYEKTKSFQQILRYHMEH
DDYDAIIQDCQKHGAKDSSLWTQALSYFAKKEEYCKSHIIEVLNHIDKYNLLSPLLVIET
LAHNSTATLGVVKDYIIRRLQQENEQIAKDERMIRKYREDTEKMKTQIEELKTSAKIFQS
SKCMICSRPLELPAVHFLCGDSFHHSCFESYSENENECPICTPENRKVMDIISAQEHNKD
LHEQFNHQLERSSDGFSVVADYFGRGVFKKVTVYSDTDGRPQQQQQQQIDPAFERESLFN
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggtccgagacccttctacatggaacaaaaatgcaatggcgttcagtcagtgg
cgaaagttcaacttctttgaaagagagctgttaaaagacccaagtacagaagaaagcttt
ggccaattaaaaggactattagtaaatgcttctgcaagtggaagaggacaaattcttttt
ggagatagcaatggagtattgcattgtcttaaccgtgatcttcgtttaacatcattcaaa
atatatgagctaaatgtgtctcatttatttcaattaaagcaacacagcatccttgtttca
gttgggcaagatgaagaaggcattaaccccatggtgaaagtatggaattttgataagttg
gataaagtaggaaatgcaatgtgtgtaaggatgtttcgtgcacttgtgggaaacaaagct
gtccaggtgtcatgcattgctgttcatgaaaatttgagtcaaatggcgattggttttgag
gatggtacagttataattataaaaggagatgttacaaatgctcgacatagtaaacagaga
acaattcatgaagacaaatatccaatcacaggtctagcatataagcagttgggaagcaag
atcattctttttgtcactacaacagaaacagtaatgtctttcaacctaactgctaaagat
cacaaggaattgttggatgaatttggtacaggcttaaattgttctgcaattagtgatgtt
tctcaagaaaatcaatttgtgattgcgaactatgatgcattatacttttatcatcccgaa
agtcgaggtccatgtcttgcatttgaaggtgataaaaagatggttggctggtttcgtggt
tatctcatagtggtcagcaaagagatgaaacaacttccaagaagtgctggaactggttta
gggatgaacattttgtcgatttacgatgttgataacaagttcatagcttactctggtccg
tttcctgatatcatggcagttttgggagagtggggtttattacatgtggtgactgtggac
ggaaagatttttcaattagaggaaaaggacacgcaaactaagttagaaacgctgtttcgt
aagaacatgtatgacatggctataaacttagcaaaaagtcagcattattcagatggcttg
attgaaatatttcgacagtatggcgatcatttgtacagtaaaggcaatcatgatggcgcc
attcaacaatacatacgtactattggtcacttggaaccctcttatgtgattcgaaagttt
ttggatgcacagagaatccataatcttacagaatatctacaagcacttcatgaaaaaggc
ttggcaaatacagaccatactacactgcttttaaactgctataccaaactaaaagctgtt
gataaattgaatggttttattcagactgacagtgaattgaattttgatgtagaaacagct
attaaggtttgtcgccaagctggatattttcaacatgctttggagttgtctgaaaaatat
gaacagcatgattggtacttgagaattcaattggaagatataaaagattacagaaaagcg
ttgaagtatatgaaaagattggcgtttttggaggccgaatcaaacttgaagacgtatggc
aaaactttagtgaataatgttccagatgaaacaacagaacttttaaagcaactgtgtaca
gactatcaacctactgaaaccaaaaagaaagaaaaattacaagatgttacaccagaacca
gaactatccgccacgagcgcacttgtctctggaactatcattatgaatcctgtacctcgt
cgggaaatactgcgttcacatccggatgattttattcatatttttgtgcatcaaaaacca
aaattaaaagaatttctagaacacatggtcaaaatgcgaaatgattgttcgaatgttacc
tacaatacgttactagaactgtatttgtacgatgcagctgcagctgtcgcaagcaaggac
ttcaagaaaggagcagatgaagaaagcaaagcgttagatttacttttgaatactgagtcg
aaatatgatgtagatcatgctatggtgcttgcgcagatgcacaacttcaagagagggata
ttgttcttgtatgaaaaaactaaatcatttcaacaaatactccgctatcacatggaacat
gatgactacgatgccattattcaagattgtcagaagcacggagcaaaagattcaagttta
tggacgcaagcgttatcttactttgcaaagaaggaggagtactgcaagagtcacatcatt
gaagtgttgaatcatattgataaatataacctcctgtctccactactggtgatcgaaaca
cttgctcataactctactgcaacgttaggagttgtgaaggattatattattcgtcgactc
cagcaagaaaatgagcaaatagccaaggatgaacgaatgattcgaaaataccgagaagat
accgaaaagatgaaaactcagatcgaagaattaaaaacaagtgcaaaaatctttcaaagt
tcaaaatgtatgatatgctcgagaccgttggaattaccagctgttcattttctgtgtgga
gattcttttcatcatagttgctttgaaagttattctgagaatgaaaacgaatgtccgata
tgtacaccagaaaacagaaaagtgatggatattatcagtgctcaagaacacaacaaagat
cttcacgaacagtttaatcatcaactcgagcgatcctcagatggattctcagtcgtggca
gattattttggtcgaggtgtctttaaaaaggtgacagtatattcggacacggatggacga
ccacagcagcagcagcagcaacagatagaccctgctttcgaaagagaatccttgttcaac
taa
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