KEGG   Hydractinia symbiolongicarpus: 130645567
Entry
130645567         CDS       T09218                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
hsy  Hydractinia symbiolongicarpus
Pathway
hsy04140  Autophagy - animal
hsy04142  Lysosome biogenesis
hsy04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:hsy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    130645567
   04140 Autophagy - animal
    130645567
   04148 Efferocytosis
    130645567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsy04131]
    130645567
Membrane trafficking [BR:hsy04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    130645567
   Hops complex
    130645567
SSDB
Motif
Pfam: TPR_PEP5_VPS11 PEP5_VPS11_N VPS11_N VPS11_C VPS18_solenoid_2nd Clathrin TPR_Vps41 zf-C3HC4_2 zf-RING_2 Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 Beta-prop_WDR3_1st zf-rbx1 Beta-prop_IFT140_1st Beta-prop_VPS8 zf-RING_5 zf-C3HC4 TPR_11 Beta-prop_RIG_2nd zf-C3H2C3 Beta-prop_HPS5 Beta-prop_RSE1_2nd zf-RING-like
Other DBs
NCBI-GeneID: 130645567
NCBI-ProteinID: XP_057307579
LinkDB
Position
5:complement(24523423..24543623)
AA seq 960 aa
MSEVRDPSTWNKNAMAFSQWRKFNFFERELLKDPSTEESFGQLKGLLVNASASGRGQILF
GDSNGVLHCLNRDLRLTSFKIYELNVSHLFQLKQHSILVSVGQDEEGINPMVKVWNFDKL
DKVGNAMCVRMFRALVGNKAVQVSCIAVHENLSQMAIGFEDGTVIIIKGDVTNARHSKQR
TIHEDKYPITGLAYKQLGSKIILFVTTTETVMSFNLTAKDHKELLDEFGTGLNCSAISDV
SQENQFVIANYDALYFYHPESRGPCLAFEGDKKMVGWFRGYLIVVSKEMKQLPRSAGTGL
GMNILSIYDVDNKFIAYSGPFPDIMAVLGEWGLLHVVTVDGKIFQLEEKDTQTKLETLFR
KNMYDMAINLAKSQHYSDGLIEIFRQYGDHLYSKGNHDGAIQQYIRTIGHLEPSYVIRKF
LDAQRIHNLTEYLQALHEKGLANTDHTTLLLNCYTKLKAVDKLNGFIQTDSELNFDVETA
IKVCRQAGYFQHALELSEKYEQHDWYLRIQLEDIKDYRKALKYMKRLAFLEAESNLKTYG
KTLVNNVPDETTELLKQLCTDYQPTETKKKEKLQDVTPEPELSATSALVSGTIIMNPVPR
REILRSHPDDFIHIFVHQKPKLKEFLEHMVKMRNDCSNVTYNTLLELYLYDAAAAVASKD
FKKGADEESKALDLLLNTESKYDVDHAMVLAQMHNFKRGILFLYEKTKSFQQILRYHMEH
DDYDAIIQDCQKHGAKDSSLWTQALSYFAKKEEYCKSHIIEVLNHIDKYNLLSPLLVIET
LAHNSTATLGVVKDYIIRRLQQENEQIAKDERMIRKYREDTEKMKTQIEELKTSAKIFQS
SKCMICSRPLELPAVHFLCGDSFHHSCFESYSENENECPICTPENRKVMDIISAQEHNKD
LHEQFNHQLERSSDGFSVVADYFGRGVFKKVTVYSDTDGRPQQQQQQQIDPAFERESLFN
NT seq 2883 nt   +upstreamnt  +downstreamnt
atgtccgaggtccgagacccttctacatggaacaaaaatgcaatggcgttcagtcagtgg
cgaaagttcaacttctttgaaagagagctgttaaaagacccaagtacagaagaaagcttt
ggccaattaaaaggactattagtaaatgcttctgcaagtggaagaggacaaattcttttt
ggagatagcaatggagtattgcattgtcttaaccgtgatcttcgtttaacatcattcaaa
atatatgagctaaatgtgtctcatttatttcaattaaagcaacacagcatccttgtttca
gttgggcaagatgaagaaggcattaaccccatggtgaaagtatggaattttgataagttg
gataaagtaggaaatgcaatgtgtgtaaggatgtttcgtgcacttgtgggaaacaaagct
gtccaggtgtcatgcattgctgttcatgaaaatttgagtcaaatggcgattggttttgag
gatggtacagttataattataaaaggagatgttacaaatgctcgacatagtaaacagaga
acaattcatgaagacaaatatccaatcacaggtctagcatataagcagttgggaagcaag
atcattctttttgtcactacaacagaaacagtaatgtctttcaacctaactgctaaagat
cacaaggaattgttggatgaatttggtacaggcttaaattgttctgcaattagtgatgtt
tctcaagaaaatcaatttgtgattgcgaactatgatgcattatacttttatcatcccgaa
agtcgaggtccatgtcttgcatttgaaggtgataaaaagatggttggctggtttcgtggt
tatctcatagtggtcagcaaagagatgaaacaacttccaagaagtgctggaactggttta
gggatgaacattttgtcgatttacgatgttgataacaagttcatagcttactctggtccg
tttcctgatatcatggcagttttgggagagtggggtttattacatgtggtgactgtggac
ggaaagatttttcaattagaggaaaaggacacgcaaactaagttagaaacgctgtttcgt
aagaacatgtatgacatggctataaacttagcaaaaagtcagcattattcagatggcttg
attgaaatatttcgacagtatggcgatcatttgtacagtaaaggcaatcatgatggcgcc
attcaacaatacatacgtactattggtcacttggaaccctcttatgtgattcgaaagttt
ttggatgcacagagaatccataatcttacagaatatctacaagcacttcatgaaaaaggc
ttggcaaatacagaccatactacactgcttttaaactgctataccaaactaaaagctgtt
gataaattgaatggttttattcagactgacagtgaattgaattttgatgtagaaacagct
attaaggtttgtcgccaagctggatattttcaacatgctttggagttgtctgaaaaatat
gaacagcatgattggtacttgagaattcaattggaagatataaaagattacagaaaagcg
ttgaagtatatgaaaagattggcgtttttggaggccgaatcaaacttgaagacgtatggc
aaaactttagtgaataatgttccagatgaaacaacagaacttttaaagcaactgtgtaca
gactatcaacctactgaaaccaaaaagaaagaaaaattacaagatgttacaccagaacca
gaactatccgccacgagcgcacttgtctctggaactatcattatgaatcctgtacctcgt
cgggaaatactgcgttcacatccggatgattttattcatatttttgtgcatcaaaaacca
aaattaaaagaatttctagaacacatggtcaaaatgcgaaatgattgttcgaatgttacc
tacaatacgttactagaactgtatttgtacgatgcagctgcagctgtcgcaagcaaggac
ttcaagaaaggagcagatgaagaaagcaaagcgttagatttacttttgaatactgagtcg
aaatatgatgtagatcatgctatggtgcttgcgcagatgcacaacttcaagagagggata
ttgttcttgtatgaaaaaactaaatcatttcaacaaatactccgctatcacatggaacat
gatgactacgatgccattattcaagattgtcagaagcacggagcaaaagattcaagttta
tggacgcaagcgttatcttactttgcaaagaaggaggagtactgcaagagtcacatcatt
gaagtgttgaatcatattgataaatataacctcctgtctccactactggtgatcgaaaca
cttgctcataactctactgcaacgttaggagttgtgaaggattatattattcgtcgactc
cagcaagaaaatgagcaaatagccaaggatgaacgaatgattcgaaaataccgagaagat
accgaaaagatgaaaactcagatcgaagaattaaaaacaagtgcaaaaatctttcaaagt
tcaaaatgtatgatatgctcgagaccgttggaattaccagctgttcattttctgtgtgga
gattcttttcatcatagttgctttgaaagttattctgagaatgaaaacgaatgtccgata
tgtacaccagaaaacagaaaagtgatggatattatcagtgctcaagaacacaacaaagat
cttcacgaacagtttaatcatcaactcgagcgatcctcagatggattctcagtcgtggca
gattattttggtcgaggtgtctttaaaaaggtgacagtatattcggacacggatggacga
ccacagcagcagcagcagcaacagatagaccctgctttcgaaagagaatccttgttcaac
taa

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