Hydractinia symbiolongicarpus: 130645880
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Entry
130645880 CDS
T09218
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsy03009
]
130645880
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
90S particles
Other 90S particles
130645880
Pre-60S particles
Other pre-60S particles
130645880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
R3H-assoc
Motif
Other DBs
NCBI-GeneID:
130645880
NCBI-ProteinID:
XP_057307990
LinkDB
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Position
5:complement(30581741..30594274)
Genome browser
AA seq
1264 aa
AA seq
DB search
MKQKVKQRNSFKKGDQCVQNPDTKKFRNQVKKNVFTHKKSQTGLTLAALEKHNEKVEDEL
DIGDLAISEKTGTSVQSKAFSIGGLTDCSNMTFSKVMDHWNSGNIIDQEKCAILAAVTEV
IRSKGGSETESEYFAALMTVLEASKDNENSIVAILYLLNLVIKRIPTTLLKARFSEVSKL
LLQVLEKYSVDGKTSLVACALDCLTTTLSAQESAVWMESSTQHCFQIMLRFTTHSKPKIR
KLAHNSVKNITKINLINHQNHPIGTAITNFCVHILAQHTSENAAISHHVLNLLKLCIQYL
GAESLKEICEAILRMLTINNPIIKTNSMQTLHALCTANPPEENFSAELNAKLISALYDFQ
PSINDPHVTNAWLALMLAAHSNLSLINEKSCLKLLPRFYGTAMTYFTSDHREVTKAAADI
MKETSEKCLEPIMDTIEEDIKRKDSSFCKIFKLIESGLRYKYQPVWDIVLQSLQYLYSKF
GKQCASVMINSVTSLIDLHASPAFPFMSSLNRAIGAAFKTFGPQMILNERPLKLVRQDDQ
CDFPLAWLLPVMKDCIQNTQLAFFISYFLPMAATLRGKALKCRESKQDLEAKVYETLVTQ
IWALLPGFCTNPTDLKESFKSIAKILGTALMERNDLRPLVLLALRTLINRTLDEEELTVI
GKFAKNYMPILFNLYTSNDENCKAISLSILETIKAFLIVAESTLVQTFVKKIFEKLKEED
SAEKRHLLMDLAVCMVKYSTEEQVRGLYQLVTGHVQDKDKSMQKKAYRILEEICSSNSES
CKNLVEEKFDELMSVLVDSLSSAVPSSKAPRLGCISSLVKKLSNENKDFLQVIIPEVILC
TKEVGVKAKTAAFDLLVDIGSSYVFLSTLPKEECIEQYFHFVMAGLAGSPHMISATLLAF
TKLVFEYRYCISAKLVATLLDAAITLLKSKTREVIKSCLLFIRAVVKILDANELSGHLES
LIKNLFVWNTQNSSAYRQQIRRILEKLDKKCGYHLVKSLVPNEHKRFIVQIHKTIERTKR
QREAYRNSKNNSEESEDETTKETTWDDVLADSDEEENEDKKKIKQQEKKQKKSKHAKTWI
VENEEGVDLLDPTVAKNIVATKPKHKKMIKHDFSFSSDGKIVVKDEDQEIENNDEAALDV
GEKDILGGYDKTPKQIKLGKRKRMEDMPEDENVFQKYEHGGIGIHRHRDADDSAKKKLGA
DYKAKKAGGDMKLKGKPDPYAYIPLDRQKLNKRKKAKLSGQFHGMVKATRKGAAAANKYK
KKRK
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaaggtaaagcaaagaaattccttcaaaaaaggtgaccaatgtgttcaaaat
ccagatacaaaaaaattccgaaatcaagtaaagaagaatgtttttactcacaaaaaatca
caaactggtttaaccttggctgcgttggaaaagcataatgaaaaagtagaggatgagtta
gatattggtgatttggcaattagtgaaaaaactggaacatcagtacagtctaaagctttt
tctatcggtggattaacagattgttccaacatgacttttagcaaagtaatggatcattgg
aattcaggaaatattattgatcaagagaaatgtgcaattcttgctgctgttacagaggtt
atccgttcaaagggtggttcagaaactgaatcagagtattttgctgctctaatgactgtt
cttgaagcaagtaaagacaatgaaaattccatcgtagccattttgtatctcctgaatcta
gttatcaaaagaattccaactactttactgaaagctagattctctgaagtgtcaaagttg
ttgttgcaagtgttagaaaagtattctgttgatgggaaaacatcacttgtggcttgtgcc
ctggactgtttaacaactactttgtcagcacaagagtcagctgtgtggatggaatcttca
actcagcattgttttcaaatcatgttaaggttcacaactcattctaaacctaagattcgc
aagctggctcacaattcagtgaagaacataacaaagatcaatctgataaaccatcaaaat
catccaattggaacagctatcacaaacttttgtgttcatatattagcacaacatacatca
gaaaatgcagcaatttctcaccacgttttaaatttgttgaaactgtgcattcagtacttg
ggagcagagagtttaaaagaaatttgtgaagccatattacgtatgctaacaattaataac
ccaattataaaaacaaattccatgcaaacactgcatgctttgtgcactgctaacccgcct
gaagaaaacttttctgcggagttaaatgctaagctaatatctgctttgtatgatttccaa
cccagcatcaatgatccacacgttactaatgcttggcttgcactcatgttggctgcacat
tcaaatctgtcattaataaatgagaaatcatgcttgaagcttttaccaagattttatggc
actgcaatgacctactttacgtctgatcaccgtgaagtaacaaaagcagccgctgacatc
atgaaggaaacaagtgaaaaatgcttagaaccaataatggacactattgaagaagacatc
aaaaggaaagattcgtcattctgcaaaatattcaaattaatagaatctggtctgcgttat
aagtaccaaccagtgtgggatatagtgctgcagtcgttacagtatttatattcaaaattt
ggaaaacagtgtgcctctgttatgattaacagtgtaaccagtctaatagacctgcatgct
agccctgcatttcctttcatgtctagtttaaatagagctataggagctgctttcaagact
tttggacctcagatgattttaaacgagagaccattaaaacttgtgagacaagacgaccaa
tgcgacttcccacttgcttggctgcttcctgttatgaaggattgtatccaaaacacacag
ctggctttctttatctcctactttcttcctatggcggctacattgagaggcaaagcatta
aagtgtagagagtcgaagcaagacttagaagctaaagtgtatgaaacgctagttactcag
atttgggctttattacctggattttgcaccaatcccaccgatttgaaagagtcttttaaa
agtattgcgaaaatcttgggaacggcattgatggaaagaaatgatctgcgacctctggta
ttgctagccttaagaacattaattaacaggacgcttgatgaagaggagttaacagttatt
ggaaagtttgcaaagaattacatgcctattctatttaatttgtacacctccaacgatgag
aactgtaaagccatatcactgtccattcttgaaacaatcaaagcatttcttattgttgca
gaatccacacttgtacaaacattcgtaaagaagatatttgaaaaacttaaagaagaagac
tctgcagagaaaaggcatcttttgatggatttagcagtatgtatggtgaagtactcaaca
gaggaacaagtacgaggtttataccagcttgtcactggtcacgtgcaggacaaggataaa
agcatgcaaaagaaggcttatcgtatactggaagaaatctgctccagtaattctgaaagt
tgtaaaaatttggtggaagaaaaatttgacgagttaatgtcagtgttggtggattcgtta
tcaagtgcagttccgtcttcaaaagctccacgtcttggttgcatttcttctcttgtgaag
aagttatcaaatgagaataaagatttcttacaagtaattatacctgaggtcattttatgc
accaaagaagttggtgttaaagccaaaacagctgcttttgatttgttggttgatattgga
tcatcatatgtttttttgagtactctacccaaagaagagtgtattgagcagtatttccat
ttcgttatggctggcttggctggctcccctcacatgatcagtgcaacgctactggctttc
acgaaacttgtttttgaatacagatattgcatatcagcgaagctagtcgctacattgctc
gatgctgctataacattattgaaatcaaaaacaagagaggtcatcaagtcctgtttactt
ttcatcagggccgttgtcaaaatcctagatgcaaatgaactatctggacacttagagagc
ttgatcaagaacttgtttgtgtggaacacgcagaatagcagtgcttacagacaacaaatc
agacggatcctcgaaaaactcgacaaaaaatgcggttatcatctggtgaagtctcttgtt
ccaaacgagcacaaacgatttatcgttcaaattcacaaaacaattgaaagaacaaaaaga
caaagagaggcatatcggaactctaaaaataactctgaagagtctgaggacgaaactaca
aaagaaaccacgtgggatgatgtacttgcagattcagacgaagaagaaaacgaagacaag
aagaaaataaaacaacaagaaaaaaaacagaagaaatctaagcatgctaaaacatggatt
gtggagaacgaagaaggggttgacttacttgatccgacagttgctaaaaatattgttgca
acaaaaccaaagcataaaaagatgatcaaacatgatttttcattctcttcggatggtaaa
atcgtcgtcaaagatgaagaccaggaaatcgaaaacaatgatgaagcagcgttagatgtt
ggagagaaagatattttaggaggatatgacaagacaccaaagcagataaaactgggtaaa
agaaagcgtatggaagatatgccagaagacgagaacgtgtttcaaaagtacgaacatggt
ggaattggtattcatcgacatcgagatgcagatgattctgctaaaaagaagttaggagca
gattacaaagctaagaaagctggaggtgatatgaagctgaaagggaagcctgacccgtac
gcttatattccactcgatagacaaaagttaaataaaagaaaaaaggcgaaactttctggt
caatttcatggaatggttaaggcgaccaggaaaggagctgcagctgctaataaatacaaa
aagaaaagaaagtga
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integrated database retrieval system