Hydractinia symbiolongicarpus: 130646194
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Entry
130646194 CDS
T09218
Name
(RefSeq) uracil-DNA glycosylase-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130646194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130646194
Enzymes [BR:
hsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
130646194
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130646194
Prokaryotic type
130646194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Alginate_lyase
Motif
Other DBs
NCBI-GeneID:
130646194
NCBI-ProteinID:
XP_057308330
LinkDB
All DBs
Position
5:complement(33773524..33786856)
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AA seq
327 aa
AA seq
DB search
MLTILLKSRSSYRYKVTQIVNKFMMPPKSKKQDNKQKNIASFFTKPGKRSSDNKNNDDTP
SSKKTKTNLDTSPPLSPDQRKRIEENKKEALKKLEHNAQQGIDMGHSWKVALQSEFTKPY
FQKLQDFLIAERKRATIYPPEKHVYSWTRFCDIQDLKVVILGQDPYHGPNQAHGLCFSVQ
IGVPAPPSLVNMYKELASDISGFKKPDHGHLVGWAKQGVLLLNACLTVEASKPNSHKDKG
WEKFTDATVKYINDNLNNVVFILWGGYAQKKGKFLNKSRHLVLTGVHPSPLSAHRGFFGC
KHFSKANEYLKKNRNKEIDWSYLPASL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaattctattgaaatcaaggagttcatatcgatacaaagtaacacaaattgta
aacaagttcatgatgcctcctaaatctaaaaaacaagataacaaacaaaagaacattgca
tcgttttttacaaaacctggaaaacgaagtagtgataataaaaataacgatgacacccca
tcctctaaaaagacaaaaacaaacctggatacttctccaccactttcaccggatcaaagg
aaaagaatagaagaaaacaagaaagaagctttaaaaaaactggaacataatgcacaacag
ggaatcgacatgggacattcatggaaagtagccttacaatctgaatttacaaagccatac
tttcagaagcttcaagattttttaattgcagaaagaaaaagagctactatatatccccct
gaaaaacatgtgtatagttggacaagattttgtgacatacaagaccttaaagttgttatt
cttggacaagatccgtatcatggaccaaatcaagcacatggtttgtgcttcagtgtacaa
attggagtacctgcaccaccaagtcttgtcaacatgtataaagaattagcaagcgacatt
tcaggatttaaaaagccagatcatggacatctagttggttgggcaaaacaaggtgtgttg
ctactgaatgcatgtttaaccgttgaagcaagtaagccgaattctcacaaagataagggt
tgggagaaatttaccgatgccacagtaaagtacatcaacgataatttaaataatgttgtg
ttcatcttatggggaggatatgctcaaaagaaaggaaaattcttgaacaaaagccgccac
cttgttttaactggcgtacatccttctccattgtctgctcatcgtggttttttcggttgc
aagcacttctcgaaggcgaatgaatatttgaagaaaaacagaaacaaagaaatagattgg
tcgtatttgccagccagtttgtga
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