Hydractinia symbiolongicarpus: 130646377
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Entry
130646377 CDS
T09218
Name
(RefSeq) uncharacterized protein LOC130646377
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130646377
Enzymes [BR:
hsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130646377
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130646377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-RING_6
LCD1
Dit_like
Motif
Other DBs
NCBI-GeneID:
130646377
NCBI-ProteinID:
XP_057308499
LinkDB
All DBs
Position
1:22391558..22394462
Genome browser
AA seq
428 aa
AA seq
DB search
MHSYYSNRWLNNSTFFIHFLKSRNRFNWCYHQNYENQNLHYCYMACERAKKRKADCRVER
CNLRDHSQRKNTIMHITCPVCTISVRGDKALKSHYLMEIKRMRKPFENMESKRKFYRMKL
RSSNAEQEEESSHSNEITDLETRVTDLKDIKKRKFNRYANMFLLSKQNNHNKPSSSSSQT
DESAQYNLISCSVCNEFLELSNEKTTKHLAKCFAKRDYEYNLYSSSDEEEEETVEEFSWA
GQTWIRTSSLVDSDLLRREGRLMRMEMEDGDEELDVDGGDWFGEQQFAETDVIPCTSNSA
GKKTRVLRAPVTEGPSCGNQYSNSTSHSNDALQQASEESIKMLEEKSAGDSKKFIDSLKH
KIIQMEERLDIEVSKCSICMNPYTDPVVSTGCWHVCCSECWMRTLGAKKLCPKCNNIVAP
SQLRKIYL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcacagttattattcaaacaggtggttgaataactctacatttttcattcattttcta
aaaagtagaaacagattcaactggtgttatcatcaaaattatgaaaatcagaacttacac
tattgttacatggcttgtgaaagagccaaaaaaagaaaagcagattgtagagtagaaagg
tgcaatttgagagaccatagtcaaagaaaaaacactattatgcacattacttgtcctgta
tgtactatttctgttagaggagataaggcattaaaatcacattatttgatggaaataaaa
cgtatgcgaaagccattcgaaaacatggagtcaaaaagaaagttttacagaatgaaatta
cgaagttctaatgctgaacaagaagaagaatcttcccattctaatgaaattacagacctt
gaaacccgtgttacagatttaaaggatatcaaaaaacgaaaattcaatagatatgccaat
atgtttctcctttcgaagcaaaataatcataataaaccatcttcgagttcttctcaaaca
gacgaatcagctcagtataatttgatttcatgttcagtttgtaatgaatttctagaattg
tctaatgaaaagacaactaaacatttagctaaatgttttgcaaagagagattatgagtat
aatttgtacagcagcagtgatgaagaggaggaggaaactgtggaggagttttcttgggct
ggtcaaacttggatacgtacgtcatctcttgttgattcagatcttttgcgtcgagaggga
cggttgatgcgcatggaaatggaagatggagatgaagagttggatgttgacggtggtgat
tggtttggtgaacagcagtttgctgaaactgacgtgataccgtgcacatcgaattctgct
ggcaaaaaaacacgtgtcttgcgtgcaccggttacggagggacccagttgtggtaatcaa
tattccaactcaactagccattcgaacgacgcgttgcaacaggctagtgaggaaagtatc
aaaatgctggaagaaaaaagcgcaggggatagtaaaaaatttatcgattcactaaagcat
aaaatcatccagatggaagagcgacttgatattgaggtttcaaagtgttcaatctgcatg
aatccatatactgatcctgtggtttcgaccggttgctggcatgtttgttgcagtgaatgc
tggatgcgaactctcggtgcaaaaaaattatgtccgaagtgtaataatattgtagctcct
tctcaattaagaaaaatatatttataa
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