Hydractinia symbiolongicarpus: 130647020
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Entry
130647020 CDS
T09218
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130647020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsy03041
]
130647020
Spliceosome [BR:
hsy03041
]
Complex A
Other components
Complex A specific factors
130647020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
SLU7_N
KH_KRR1_2nd
zf-CCHC_3
DnaJ_CXXCXGXG
zf-CCHC_5
IOC2_C
Rhodanese_C
Motif
Other DBs
NCBI-GeneID:
130647020
NCBI-ProteinID:
XP_057308712
LinkDB
All DBs
Position
6:complement(12152511..12160714)
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AA seq
636 aa
AA seq
DB search
MVGTGANRMPLTKIHPVLLGQQKGDGPSLLAQHRQQHQERLHQRNASSSTQNQMDGPPGY
GQHGPNHAMNNMRYPPPNMYQQRPPFNQNMPPPGYGPPGQQNFNQGQQYGNNQGFLSPAN
NDAPRRKRKRASRWGDKEDKTIVNGPTTLPANLTEEQRKHYLVQFKIEEITLKLRTGELG
IPDDPADRSPSPEPIYNSEGKRLNTREFRVRKKLEEERHALIKQAIDEIPNYKPPVDYKP
PASKICDKVFIPAERNPAVNFIGLLIGPRGNTLKRLEKETGCKIIIRGKGSVKEGKVGRI
PGQLMPGEDEPLHALITGPTEQEVKKGVQVVGDIVKEGIECPDAANELRRNQLRELAELN
GTLIDEEIIKCKNCGATDHRHWECQEQKNVTSQITCHKCGGYGHVAVDCRAQVDSSTGPL
QTFAEKAKMDTEYMSLMAELGVDAPQPAKKTFPDHQPPSQGFKDTHGQANRDKDSFQDSN
RRRESKWGPPSGNPQGPKSLMDVNFGNKSSNQYGSPVGSNSQPPPWLNQQRGPRPQQGSP
ANMNNAPWQQGPARGAVPNYGSAPPPPPQNSQMGNMPTTAAYPQQTQGGWQQPTGYPQWQ
NPYGYNPYQQMANAYAPPPPWNQQPPPPPPPPPPSS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggttggaacaggggcaaatcgtatgcccttgaccaaaattcatccagtattattagga
cagcaaaaaggagatggtccaagtctgttggcacaacacaggcaacaacaccaagagaga
ctacaccaaagaaatgcctctagctctacacaaaaccagatggatggacctcctggatat
ggtcagcatggtcctaatcatgctatgaacaatatgagatacccaccaccaaacatgtac
cagcaaagaccacctttcaatcagaatatgccaccaccaggatatggaccccctggtcaa
caaaattttaatcaaggtcaacaatatggaaataaccaaggttttttaagtccagctaat
aatgatgcaccgcgtagaaagcgcaagagagctagtcgatggggagacaaagaagataaa
acaattgtgaatggtcccacaaccctacctgctaatttgactgaggaacaaaggaaacac
tatttagtacaatttaaaattgaagaaataacgttaaagcttcgaacaggggaattggga
attcctgacgatcctgcggacagatcaccttcaccagagcccatctataactctgagggc
aagcgattgaacactagagagtttcgagtaagaaagaagttagaggaagagcgacatgct
ctaattaaacaagctattgatgaaattccaaattacaagccaccggttgattacaaacca
ccagcatcaaaaatatgtgacaaagtatttattcctgcagaaagaaatcctgctgtgaac
tttattggtctgttaattggaccaagaggaaatacattaaaaaggctagaaaaagagact
ggttgtaaaattattattcgtggaaaaggctcagtaaaagaaggaaaagtggggcgcatt
cctggtcagctgatgcctggggaagacgagcccttacatgctcttataactggtccaaca
gaacaagaagttaaaaagggtgtacaagttgttggtgatattgtgaaagaaggaattgaa
tgccctgatgctgcaaatgaactccgtcgaaaccagttacgagaattggctgaattaaat
gggacactgattgatgaagagattatcaaatgtaaaaactgtggagcaactgatcatcgt
cactgggaatgtcaagaacagaagaatgtaactagtcaaataacttgccacaagtgtggt
ggatatggtcacgtggctgtcgattgtcgtgcccaagttgattcttctactgggccgttg
caaacatttgcagagaaagcaaaaatggatacagagtatatgtcgttaatggctgagtta
ggtgttgatgctccacaaccagcgaagaaaaccttcccagatcaccaacctccttcacag
gggttcaaggacactcatggtcaggctaaccgtgacaaagattcatttcaagatagtaac
cgaagacgtgagagtaaatggggacctccatctggaaatcctcaaggtccaaaatcttta
atggatgtcaactttggaaataaatcatcgaatcagtatggttcaccagtcggttcaaat
tcccaaccacctccatggcttaaccagcaacgtggacctagacctcaacaaggttcacca
gcgaacatgaataatgcaccgtggcagcaagggcctgctcgtggagctgtaccaaactat
ggaagtgctcctcccccaccaccacaaaattcacaaatgggaaatatgcctacaacagcg
gcttatcctcagcaaacccaaggaggatggcaacaaccaacaggatatccgcaatggcaa
aatccttacggatataatccatatcaacaaatggctaacgcttatgcacctcctccacca
tggaaccaacagccacctccccctccgccgccaccgccaccatccagttaa
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