Hydractinia symbiolongicarpus: 130647113
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Entry
130647113 CDS
T09218
Name
(RefSeq) syndecan-2-like
KO
K16338
syndecan 4
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04512
ECM-receptor interaction
hsy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130647113
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130647113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsy00535
]
130647113
Proteoglycans [BR:
hsy00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
130647113
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Syndecan
Podoplanin
RIFIN
Adeno_E3_CR2
Glycophorin_A
CBP30
Dsc3_C
Myc_target_1
FANCI_HD2
MotB_plug
Motif
Other DBs
NCBI-GeneID:
130647113
NCBI-ProteinID:
XP_057308836
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All DBs
Position
6:complement(14326999..14329767)
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AA seq
245 aa
AA seq
DB search
MKLSVKLLCLFVVIISVKSNDEEKGILKFEEGGDNMDTESINNILKKMSKKFKNVDDEDS
VGSGNDDEDSESSGSGDEEESGDGSGAVLPTKRVTTGTKERKKASPTVININYVSTTTEK
TTTMSNNVEVKSTDTVEENNNVNEGEGGENEEKEIEVQPDDETGNNKRQVGDNNRKKVAK
GGVNFTVGIIIGVVVGAVLAILIIVFLVYRLRKKDEGSYSLDEQSSTTYLRGDTDNPTKG
KEYFA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcagtgttaaacttttgtgtttatttgttgttattatttcggtaaaaagcaac
gatgaagaaaaaggcatacttaaattcgaagaaggtggagataatatggacactgaaagt
ataaacaacattttaaaaaaaatgtcaaagaaatttaaaaacgttgacgatgaggactca
gtaggatcagggaatgatgacgaagattcagagtcttctgggagtggtgatgaagaggag
agtggggatggaagtggtgctgttttgcctactaagagagtgacaacaggaacgaaagaa
agaaagaaggcctcacctactgtgatcaatataaattatgtttctacaaccaccgagaaa
actaccactatgagtaacaatgtggaagttaaaagtacagatacagttgaagaaaataac
aatgtaaatgaaggtgagggaggtgaaaatgaagaaaaagagattgaagtgcaacctgat
gatgaaactggcaataataaaaggcaggttggcgataacaaccgtaaaaaggttgccaaa
ggaggagtgaacttcactgttggaattattattggtgttgtcgttggtgctgtattggct
attttgattattgtgtttttggtttacagactacgcaaaaaagatgagggtagttacagc
cttgatgaacagtcatcgacaacttacctaaggggggatacagacaatccgacaaaggga
aaagaatattttgcataa
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integrated database retrieval system