Hydractinia symbiolongicarpus: 130647126
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Entry
130647126 CDS
T09218
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130647126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130647126
03016 Transfer RNA biogenesis [BR:
hsy03016
]
130647126
03012 Translation factors [BR:
hsy03012
]
130647126
04131 Membrane trafficking [BR:
hsy04131
]
130647126
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsy04147
]
130647126
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130647126
Transfer RNA biogenesis [BR:
hsy03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130647126
Translation factors [BR:
hsy03012
]
Eukaryotic type
Elongation factors
130647126
Membrane trafficking [BR:
hsy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
130647126
Exosome [BR:
hsy04147
]
Exosomal proteins
Proteins found in most exosomes
130647126
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
DUF34_NIF3
Motif
Other DBs
NCBI-GeneID:
130647126
NCBI-ProteinID:
XP_057308855
LinkDB
All DBs
Position
6:14539397..14541985
Genome browser
AA seq
465 aa
AA seq
DB search
MAPKAADKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYA
WVLDKLKAERERGITIDIALWKFTTKKFEVTIIDAPGHRDFIKNMITGTSQADCAVLIIA
ASTGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKIDNTEPPYSESRFNEIKKEVEGY
VKKVGYNPKAVAFVPISGWHGDNMIEPSTNMGWYKGWNVESKAGKASGKTLLEALDSITP
PERPSNKPLRLPLQDVYKIGGIGTVPVGRVETGVLSPGMIVTFAPANVTTEVKSVEMHHE
SLTEAHPGDNVGFNVKNVSIKDIKRGMVASDSKNDPAKEAKTFYAQVIILNHPGEIHAGY
QPVLDCHTAHVACKFTELKQKCDRRSGKVLEENPKMVKSGDAAMVTLTPSKPMCVEAFSD
YQPLGRFAVRDMRQTVAVGVIKSVEKADATGKMTKSAQKATGKKK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaaggctgcggataaaatccacatcaacattgttgtaatcggtcatgttgac
tctggcaaatcgaccagtactggtcacttaatttataaatgtggtggtatcgataaaaga
accatcgaaaaattcgaaaaggaagcccaagaaatgggaaaaggctcctttaaatatgct
tgggtcttggataaattaaaggccgagcgtgaacgtggtattacaattgacattgcttta
tggaaatttacaacaaaaaaatttgaagtaacaatcattgatgccccaggacatcgtgat
tttattaagaacatgattactggtacatcacaagctgattgtgctgtgcttattattgct
gcaagtactggtgaatttgaggctggtatttccaagaatggtcaaactcgagaacatgct
ctcttagcatacactttaggtgtgaaacaattgattgttggtgtcaacaaaattgataat
actgaaccgccttacagtgaaagtcgattcaatgaaattaaaaaagaagttgaaggttat
gtgaagaaagttggttacaatcccaaagctgttgcttttgtcccaatttctggctggcat
ggtgataacatgatcgaaccatcaaccaatatgggttggtacaaaggatggaatgttgaa
tcaaaagcaggaaaagcatctggtaaaaccttacttgaagccttagatagcatcactcca
ccagaaagaccaagtaacaagccccttcgacttccacttcaagatgtgtataaaattggt
ggcattggaactgtccctgttggtcgtgtagaaactggtgtattgtcccctggtatgatc
gttacatttgcccctgccaatgtaaccactgaggtcaaatctgtagaaatgcaccacgaa
tccttaactgaagcacatccaggtgataatgttggttttaatgtcaaaaatgtgtctatc
aaggatatcaaacgtggtatggttgcgtctgacagcaaaaatgatccagccaaagaagcc
aaaaccttttatgcacaggtcatcattctcaatcatccaggtgagattcatgctggttac
caacctgttttggattgccacactgctcacgttgcctgcaaatttacagaattaaagcag
aaatgtgatagacgaagtggtaaagttttagaagaaaatcccaaaatggttaaatctggt
gatgctgctatggttactttgactccttctaagcctatgtgtgttgaagctttctctgac
taccagccattgggtcgttttgctgtacgtgacatgagacaaactgttgctgttggagtt
atcaagagtgttgaaaaggccgatgctactggtaaaatgacaaaatcagctcaaaaggct
accggaaaaaagaagtga
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