Hydractinia symbiolongicarpus: 130647239
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Entry
130647239 CDS
T09218
Name
(RefSeq) uncharacterized protein LOC130647239
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130647239
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
130647239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_N4BP1_C
UBA_6
KH_1
KH_N4BP1_1st
zf-CCCH_4
PRORP
zf-CCCH
Rota_NSP3
KH_SLS1_2
zf-CCCH_2
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
130647239
NCBI-ProteinID:
XP_057309008
LinkDB
All DBs
Position
6:complement(11038510..11043862)
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AA seq
703 aa
AA seq
DB search
MVTKDFTLSVENAGIIRLYLPHLKSLFGDVHINFEGTDTSSRTKIEWVCLTGPTGEACNK
VKNYITSLTNPSNKVIIKIPAWLQSELIRNDSSLLKELERESGAVIEVEDESGQLNIQGV
DELTVVVAKSLIDEKLEEGQKSTKNNDITKRKNELDASITEVCEGVKQFALKLGYDDNDI
MLAANKCSTKGDHVNENTLLQELVKNSPQKLKENLNQKDDKYFPVVTSTVGEVTSAQTTR
VSAVVNDDMRDIVIDGSNVAMCHGHKETFSCSGIDIVVEWFRQRGHKNIVVFVPQWRQEA
STTESPITNQDILTRLDKERVLVFTPSRRINGRRVVCYDDRYIVKHAFDTDSVVVSNDNF
RDLCKESSDWKSFIEQRLLMYSFVNDTFMPPDDPLGRCGPTLDEFLRKGTKSRPCPYKNK
CTYGSKCRFYHPEKEASSRHGRAAPSPSNSFHSSPSQTKYVPPSAMSCAAEYKAYDRTFS
NFQQDVIARGGISMSEMGEKGTDAYPARQDWNTLDRNSQGTSSYNQHYYQPNSSGYQSQH
HPNMPGYYVTSQPSYSLPSQYPYSTPENSFSHQSNVYAPHQQNNLVMRPNQSNCQQYSTP
RSYNQHLNVMPGYVDPRMLNQYYRAPTNIPVMHPVVMPIETTLVHETVGNREYLLRSEHY
PSKEDVRFSRLTEMFPGRAHVISKVLADHPNESNLNVLASFIL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggttactaaagattttaccttatcagtggagaatgcagggattattcgcctatatctt
ccccatcttaagtctttgtttggggatgtgcatataaattttgagggaacagatacgagt
tcccgaacgaaaattgagtgggtttgtttaactggcccaactggagaagcttgcaataaa
gttaagaactacatcacttctttaaccaatcccagtaacaaggtgattattaaaatccct
gcatggctacagtcagaactcattcgcaatgattcaagtttactaaaagaactggaaagg
gaaagtggtgcagttattgaagtggaggatgagtctggtcagttaaacatacagggtgta
gatgaattaacagttgtagttgcaaaatcacttattgatgaaaaattagaagaggggcaa
aagtcaacaaaaaacaatgatattactaaacgaaaaaatgaattagatgcatccatcaca
gaagtatgcgaaggtgtcaagcaatttgccctgaaactaggatacgatgataatgatatt
atgttagcagcaaataagtgcagtaccaaaggtgatcatgttaacgagaatactctttta
caggagctagtcaaaaatagtccacaaaaattgaaggaaaatttaaatcagaaagatgac
aaatattttcctgtggttaccagcactgttggtgaagtgacatcagcacaaacaacccgt
gtttcagctgtggtcaatgatgatatgcgggatatcgtaattgatggtagcaatgtggct
atgtgtcatggacataaggaaacattttcttgcagtggcatcgacattgtagtagaatgg
ttccggcaacgtggccataaaaatattgttgtgtttgtaccacaatggcgtcaagaagca
tcaacaacagaaagtccaatcacaaatcaagatatattgactcgtttagataaggagaga
gtcttagtttttactccatcacgtcgtataaatggtcgtcgtgttgtttgttatgacgac
cgttacattgtaaaacacgcatttgacactgacagtgttgttgtgtcaaatgataacttc
cgcgatttgtgcaaagaatcatctgactggaagtcatttattgagcagcgcctactgatg
tactctttcgtgaatgacacatttatgccaccagatgatccattgggtaggtgtgggcct
actctagatgaatttttacggaaaggcacaaaaagtagaccttgtccctataaaaacaaa
tgtacttatggtagtaagtgtcgcttttaccatccggagaaagaagcaagtagtagacat
ggacgtgctgctccctcaccttccaatagctttcattcatctccaagtcaaacaaaatat
gttcctccaagtgcaatgtcatgtgctgcagaatacaaggcttacgatagaacttttagt
aattttcagcaggatgtgatagctcgaggtggcatatccatgtcggaaatgggtgaaaag
ggaacagatgcataccctgccagacaggactggaacactttagacagaaatagtcaagga
acttcatcttataaccaacattattatcaaccaaactcaagtgggtaccagtcccagcat
cacccgaacatgccaggttattatgtaacttcccagccttcctattccctgccatcccag
tatccatattcaactccagaaaattcattttctcaccaaagtaacgtttatgcaccacat
cagcaaaacaaccttgtaatgcgaccaaatcaatcaaattgtcagcagtattcaacacca
aggtcttataatcaacatttaaatgtgatgcccggttatgttgatccgagaatgcttaac
caatattacagggcaccgaccaatatccctgtaatgcatcctgttgttatgccgattgaa
accacgttggtccatgaaacagttggcaatcgcgagtatttgcttagatctgagcattac
ccttcgaaggaagacgttcggtttagtagacttacagaaatgtttccaggaagagcgcat
gtgatatcaaaagtactggcagaccatcctaacgaatcgaaccttaatgttttagcttct
tttattttataa
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