Hydractinia symbiolongicarpus: 130647560
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Entry
130647560 CDS
T09218
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsy03009
]
130647560
03036 Chromosome and associated proteins [BR:
hsy03036
]
130647560
Enzymes [BR:
hsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130647560
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
Pre-60S particles
Helicases
130647560
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130647560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
ERCC3_RAD25_C
CMS1
Cas3-like_C_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
130647560
NCBI-ProteinID:
XP_057309444
LinkDB
All DBs
Position
6:complement(21586689..21599431)
Genome browser
AA seq
715 aa
AA seq
DB search
MASLISRFLVHVNTRTNFLVQSKKIYHFNWICRRYLLQQHQHELTMVQKGKDLKSSRTVS
KLKTDISIDNDGKEKDVPRRRPRTRSQSEAELANEVKEETDLSEGDFSNFKISKKTVKKL
LANGVKELFPVQYKTYNEIQEGLDLIVQARTGTGKTLAFCLPVLEIIRKDEDNVCNGKQR
APVVLTLAPTRELAIQIYKEVEKYKSKKMNASCFYGGSSYDKQESELWNGIDVLVGTPGR
ILDYIRKGALNVSKLRHVILDEADRMMDMGFQESLDEILSQAYTKDNKPQTLLFSATVPP
WVRSTSKKYMSKNMKVIDLVGTDINRGSTTVEHNAIKCSYWERPATIKDIIQVHGGKFGK
TIIFTSTKQEANELALSSVINMDSQVLHGDIQQKQREITLQGFRNGKFNCLIATDVAARG
LDIPEVDLVIQTEPPKDVESYIHRAGRTGRAGRTGKCVIFFKQGQEYGVQAVERKAGITF
TRIGAPQQADIISSSASDAVRSLDEVKDDVIKYFLPSAQTLIEERGAENALAAALAFISG
TTEIVNRSMLTSQAGYTTYLMKQNWELRGSGLIWSILKRHFDQEFTDSIRGMRICKDKLG
CVFDVPTANVKVIEECWKGDKFATLEQITELPELAEGVASNSFGGSNSGFGNRSNSFNRN
NNFGNRGNNFGNRNNSFNNNNSFNGNRGFQRTGTDSRKRPYNRDNNDSSKRQRNF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctgatatcacgttttcttgtacatgtaaacactcgaactaattttttagtg
caaagtaagaaaatttaccattttaactggatttgtcgacgctatttgttacaacaacac
caacacgagcttaccatggttcaaaaggggaaagatttaaaatcttctaggacagtttca
aaattaaagacggatattagcattgataatgacggaaaggaaaaagacgttccacgaaga
agaccaagaacaagatcccaatctgaagctgaattggcaaatgaggtaaaagaagaaaca
gatttaagtgaaggagatttttcaaattttaagatatcaaagaaaacagttaaaaagcta
ctagccaatggtgttaaagagctttttcctgttcaatataaaacctacaatgaaattcag
gaaggattggacttgatcgtacaagcaagaacggggactggaaagactttagctttttgt
ttaccagtattggaaataattcgaaaggatgaggacaatgtttgtaatggtaaacaaagg
gcacctgttgtgttgactttagcaccaacaagagaattagctatccagatttacaaagaa
gtggaaaaatataagtcaaaaaagatgaatgcatcatgtttctatggtggctcctcctat
gacaagcaagaaagcgaactatggaatggcatcgatgtgcttgttggtacaccaggccgt
attttagattatataagaaaaggcgcattaaatgtgtcaaaattaaggcatgtgatatta
gacgaagctgatcgtatgatggatatgggttttcaagagtctcttgacgaaatactttct
caagcatacacaaaagacaataaaccacaaacacttttgttttcggccactgttccgccc
tgggtgcgaagtacgtctaaaaagtacatgagtaagaatatgaaggtgatcgatcttgtt
ggtacagacatcaatagaggatcaactactgttgagcataatgcaataaaatgttcatac
tgggaacggccagccacaataaaagatattatacaagtgcatggtgggaaatttggaaag
actatcatattcacctcaacaaaacaagaagccaatgagcttgcgttaagctctgtcatt
aacatggattcacaagttttacatggagacattcaacaaaaacaaagagaaatcacttta
cagggttttcgaaatggtaaatttaactgccttattgccactgatgttgcagcacgtgga
cttgatattccagaagtagacttagttatccagactgagcctccgaaggacgtggaatct
tacatacatcgtgcaggtcgaactggtcgtgctggaagaacagggaaatgtgttatcttt
tttaaacaaggccaagaatatggcgttcaagccgtggagagaaaagctggtataacattc
acacgtataggtgcacctcaacaagcagacatcatcagctcgtcagcatctgatgcagtc
agatcattggatgaggtaaaagatgacgtcattaaatatttcttaccttccgcccaaact
cttatagaagaacggggcgcagagaatgctctcgctgctgcactggcgtttatatctggc
acaacagaaattgtcaatcgttcaatgctgacttcacaagctggctacactacttacttg
atgaagcaaaattgggagttgcgtggaagtggattgatctggagtatattgaaacgtcat
ttcgatcaagaatttacggatagtatacgtgggatgagaatatgcaaggataaactggga
tgtgtgttcgatgtaccaacagcaaatgtgaaagtgattgaggagtgttggaagggcgat
aagtttgccacgctggaacaaattacagaactacctgaacttgctgaaggtgttgcatcg
aatagcttcggcggaagtaacagtggattcggcaaccggagcaatagttttaatcggaac
aataatttcggaaaccgcggtaacaacttcggaaaccgtaataacagtttcaataataat
aatagttttaacggcaaccgaggttttcagaggactggtacagatagtagaaaacggcca
tataatcgcgacaataatgattcttcgaaaagacaaaggaatttttaa
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