Hydractinia symbiolongicarpus: 130647602
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Entry
130647602 CDS
T09218
Name
(RefSeq) exosome complex component RRP41-like isoform X1
KO
K11600
exosome complex component RRP41
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130647602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130647602
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130647602
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
130647602
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Mur_ligase
Motif
Other DBs
NCBI-GeneID:
130647602
NCBI-ProteinID:
XP_057309504
LinkDB
All DBs
Position
6:complement(22316900..22318317)
Genome browser
AA seq
248 aa
AA seq
DB search
MAIKMAGLELISPEGLRIDGRKCHELRKIICKKGIFVQADGSAYIEQGNTKVIASVYGPH
EVVNRSKALHDSVIINCQFSMATFSTSERKRRPKGDRKTTDISLTLQKTFETAIMKELYP
RSQIDIYVQALQSDGSNVAACINAATLALIDAGVPMRDFVCACTSSYVQESCLADINYLE
ESSGSARLTLALLPRTEKIVLFQVDSKLHVDNLEQLLETSKKACLDVFTVLQQAVESDST
DQSITLVV
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggctataaaaatggcaggtttagagttgatctcaccagaaggattgcgtatagatgga
agaaaatgtcatgagttacggaaaattatatgtaagaaaggaatatttgtacaagctgat
ggttctgcctatattgaacaaggtaataccaaagttatcgccagtgtgtatggaccccat
gaagttgtgaatcgttcaaaagctttacatgattctgtcataatcaattgccagtttagt
atggctacattcagtacaagtgagcgtaaacgtaggccgaaaggtgacaggaagacaact
gatatttcactgactttgcaaaaaacgtttgagacagctattatgaaggagttatacccc
agatcacaaatagatatctatgttcaagctttgcagtcagatggtagcaatgtagcagcc
tgtataaatgctgcaacactggctttaattgatgcaggagttccaatgagggattttgtt
tgtgcatgtacttcaagttatgttcaggagagttgccttgccgatatcaactacttagag
gaaagctctggttctgctagattaacgttagctttacttcctcgcacagaaaagattgta
ttgtttcaggtggattctaaacttcatgttgataatttggagcagttactggagactagc
aaaaaagcatgcttggatgtatttacagttttacagcaagctgttgagtcagattccaca
gaccaatcaatcacattagttgtttaa
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