Hydractinia symbiolongicarpus: 130647965
Help
Entry
130647965 CDS
T09218
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130647965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130647965
03036 Chromosome and associated proteins [BR:
hsy03036
]
130647965
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130647965
Coactivators
SAGA/TFTC/STAGA complex
130647965
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130647965
STAGA complex
130647965
TFTC complex
130647965
SAGA complex
130647965
SLIK complex
130647965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CBFD_NFYB_HMF
Bromo_TP
Histone
TFIID-31kDa
AKAP95
Motif
Other DBs
NCBI-GeneID:
130647965
NCBI-ProteinID:
XP_057309960
LinkDB
All DBs
Position
6:complement(9168747..9170462)
Genome browser
AA seq
504 aa
AA seq
DB search
MAGVNSEDSQSKVKDLYVEGAYTNEVVKTIVESAGYDKPPDDVLQYLAETITFRIKQIVQ
EAAKFQNKSKRKQLKSADIDNALRVKNVEPVYGFSSSDFVPFRYASGGGREVYFQEEQEV
DLEEIMSQNLPKIPLDIALKSHWLAVDGVQPSIPENPPPISKDIQLKDNVDPVIKSEHIS
EVPVDGLPQEEKTHVKDTKQKEHKLDKKKMEEFKKMKDAHKNDVQKLKPLVTHELSVEQQ
LYYKEITEACVGSNEVKRTDALQSLSSDPGLYQLLPHFVTFIAEGVRVNVGQHNLALLIY
LLRMIKSLMENSTLYLEKYLHELVPAVITCIVNKQLCPRPDFENHWALRDFASRLMALIC
KHFSTTTNNIQSRVTKTLCTSLYNENAPLVTHYGAIAGLSELGLEVLKFFVLPRLKLEGD
LIKQALEGNTSDKKSAEHLQALLIKHCSVAIAKTHSPPDVHAQFVTDFGYLGTAICTKVQ
QLRMSQGNPSRTPVTPVLLQAMSK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgtaaatagtgaagattcacaatctaaggtcaaagatctttatgtggaaggg
gcatatacaaatgaagtagttaaaactatcgtagagtcagcaggttacgataagccccct
gatgacgttcttcaatatttggcagaaactatcactttccgtataaagcaaatagtccag
gaagcagctaagtttcaaaacaaatcaaaacggaaacagttgaaatcagctgatattgat
aacgctttgcgagtgaaaaatgtcgaacccgtatatggatttagctcaagtgactttgtt
ccattccggtatgctagcgggggaggccgtgaagtatactttcaggaggaacaagaggtt
gaccttgaagaaattatgtctcaaaatttgccaaaaattccattagatattgctctcaaa
tcgcattggcttgcagtagatggtgttcagccatctatacctgaaaatccacctcccata
tctaaagatatccagttgaaggataatgtggatccagtgataaaaagtgaacacataagt
gaagttccggttgatggtttaccccaagaagaaaagacacatgtcaaagatacaaagcaa
aaagaacataagttagacaagaaaaaaatggaggaatttaaaaagatgaaagatgcacac
aaaaatgacgttcagaagttaaaaccattggttacacatgagttgtctgtggaacaacaa
ttgtattataaggaaattacagaagcttgtgttgggtccaatgaagtaaagcgtactgat
gcccttcagagcttatcttctgatcctggactatatcaacttttacctcattttgtgact
tttattgctgagggtgtacgtgtaaatgttggtcaacacaatttggctttattaatttat
ttgcttaggatgatcaagtccttaatggaaaattcaacgttgtacttggaaaaatatttg
cacgaactggtccctgcagttataacatgtattgtaaataaacagttgtgtcctcggcct
gattttgaaaatcattgggctttgcgtgattttgcttctagattaatggccctaatctgc
aaacattttagtacaacaacaaataatattcaatctagagttacaaaaactttgtgtaca
tcgttgtataatgagaacgcacctttagtaacacattatggagctattgctggactgtca
gagttgggtttagaggttcttaaattcttcgttttgccacgattaaagctagaaggtgat
ctcataaaacaggcattagaaggtaacacttctgataaaaaatctgcagaacatttacaa
gccttactcatcaaacattgttctgtggccattgcaaagactcattcaccaccagatgta
catgcacagtttgtaactgattttggatatcttggtacagcaatttgcactaaagttcaa
cagttgcgaatgtctcagggcaatccaagcagaacaccagtcacacctgttttattgcaa
gcaatgtcaaaataa
DBGET
integrated database retrieval system
