KEGG   Hydractinia symbiolongicarpus: 130648695
Entry
130648695         CDS       T09218                                 
Name
(RefSeq) DNA ligase 1-like isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hsy  Hydractinia symbiolongicarpus
Pathway
hsy03030  DNA replication
hsy03410  Base excision repair
hsy03420  Nucleotide excision repair
hsy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130648695
   03410 Base excision repair
    130648695
   03420 Nucleotide excision repair
    130648695
   03430 Mismatch repair
    130648695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsy03032]
    130648695
   03400 DNA repair and recombination proteins [BR:hsy03400]
    130648695
Enzymes [BR:hsy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     130648695
    6.5.1.6  DNA ligase (ATP or NAD+)
     130648695
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     130648695
DNA replication proteins [BR:hsy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    130648695
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     130648695
DNA repair and recombination proteins [BR:hsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     130648695
   NER (nucleotide excision repair)
    Other NER factors
     130648695
   MMR (mismatch excision repair)
    Other MMR factors
     130648695
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C ATG29_N
Other DBs
NCBI-GeneID: 130648695
NCBI-ProteinID: XP_057310738
LinkDB
Position
7:complement(6030821..6050329)
AA seq 895 aa
MMGYGRFLHHTVFHLRINLLHTALYLNVPVYPQIKHILKRNIYPAVFCRLASNKEIDSPV
KTSKKANKKRVIDSDEESEEHNTSNKAVATNNSENTVESNGKKVKSEVSNGHEADTQNKL
PPKRKTARKSVVGPTKRKLSSEDEVPNDSSTKCQKISSQCKEDIKKCDDVSRDEKSDKEI
TKSADAKAVQVKKEADSTPCKKDTEKEESHKNVEKKKTGSFFTKTETNTEKKSEVSVKPE
NYNPSKSKYHPVDDACWNVGQKVPYQALSRTFQNIEEISARLKIQSILCNFFRSVIVLTP
DDLLSCVYLCLNKLAPAYEGIELGIGENVLMKAVCGATGKSMKEIKAEVAEKGDLGIVAE
SCRTNQRMMFAPPPLTVANVFNKLTEIAKMTGHSSMAKKTEKIQGMFVACRNSEARYLIR
SLGGKLRIGLAEQSVLVSLAHAVVLTPPGQSYPPEILDAGSCLSSESLKKDMDEAALVIK
TAYCELPTYNVIIAKLLEAGWKKLPETCHITPGIPLKPMLAHPTKGIGEVLKRFDNAEFT
CEYKYDGERAQIHVLENGKIHVFSRNQENNTTKYPDIISRMPNVMKSHVKSCIIDTESVA
WDKEKKQILPFQVLTTRKKKDVDANEIKVQVCVYAFDLLYLNGESLVRRPFKERRELLRD
AFEEIEGEFVFATSKTSSDTDEISEFLEESIQGNCEGLMVKTLDVDATYEIARRSHNWLK
LKKDYLEGVGDTLDLVVIGGYHGTGKRTGKYGGYLLACYDEENEEYQSICKTGTGFSDEQ
LLTHSTFFKNHVIEKPRSYYRYGDNVKPDHWFDAVQVWEVRAADLSISPVHKAAMGIVDP
HKGISLRFPRFLRVREDKKPEEATSANQVAQFYNSQQQIQNANEGKKAEDDDQFY
NT seq 2688 nt   +upstreamnt  +downstreamnt
atgatgggatatggtagatttttacatcacaccgtatttcacttgagaataaatttgtta
catactgctttgtatttgaatgttcctgtttatccacaaataaaacatattttaaagaga
aacatttatcctgctgtattctgcagactagcttcgaacaaagaaattgattcaccagta
aaaacatcgaagaaggcaaacaaaaaaagagtaatagatagtgatgaagaaagtgaggaa
cataatacttctaacaaggctgtagcaacaaataattcggagaatacagttgaaagtaat
ggaaaaaaggtgaaaagtgaagtttcaaatggccatgaggctgacactcaaaacaaatta
cctccgaagagaaaaactgctagaaagagtgtcgttggaccaacgaagcggaagttaagt
tcagaagatgaagttcctaacgacagcagcacaaaatgtcaaaaaatatcaagccaatgc
aaagaagacattaagaagtgtgatgatgtttcgcgtgatgaaaaatcagacaaagagatc
acaaagtctgcagacgcaaaagctgtgcaagttaaaaaagaagcagatagtacaccatgt
aagaaagacacagagaaagaggagtcccataaaaatgtagaaaagaaaaagacaggatca
ttttttacaaaaactgaaactaatacagaaaaaaaatctgaggtatcagtaaagcctgaa
aattataatccatcgaaatccaaataccatcctgttgatgatgcttgttggaatgttgga
caaaaagtaccataccaagcattgagtagaacgttccaaaatattgaagaaatttctgct
aggttaaaaatacaatcaatattgtgcaatttctttcgttctgttattgttctcacacct
gatgatctgttatcctgtgtctatttatgcttgaataaactagcaccagcatatgaaggc
atagagttaggcattggtgaaaatgttttgatgaaggctgtatgtggtgctactggtaaa
agtatgaaagaaataaaagcagaagttgcagaaaaaggtgacttgggcattgttgctgag
agctgccgtacaaatcagagaatgatgtttgctcctcctccactgactgtagcgaatgtt
tttaacaaactaacagaaatagcaaaaatgactggacattcgtccatggcgaaaaaaact
gaaaaaatacaaggcatgtttgttgcgtgtcgaaattctgaagcaagatacttaatcagg
tctctgggtggcaaactccgaatcggattagcagagcagtcagtgttagtctctcttgcc
catgctgtcgttctcactccaccaggtcaaagttatccaccagagatattagatgctggc
agttgtctatcatccgaaagtttgaagaaggacatggatgaagcagcattagtgatcaag
acagcatattgtgaattacctacctataatgtgattattgcgaaacttcttgaagctgga
tggaaaaaactacctgaaacatgtcatataacaccaggaattccattaaaacccatgttg
gcgcatcctactaaaggaattggcgaagttttgaaaagatttgataatgcagaatttact
tgtgaatacaaatacgatggtgaacgcgctcaaatccacgtgcttgagaatggcaagata
catgttttcagccggaaccaagaaaataataccactaaatatccggatattatatctagg
atgcccaacgtgatgaaatcacatgttaaatcgtgtattattgacactgaatcagttgct
tgggacaaagaaaagaaacaaattctaccctttcaagttctgacaacaaggaaaaagaag
gatgttgatgcaaatgagataaaagtgcaagtttgcgtttatgcattcgatctgctttat
ttaaatggagagtcacttgtgaggagacctttcaaagaaagaagagaactacttcgagac
gctttcgaggaaattgaaggggagtttgtgtttgccacttcaaaaacgtcatcggataca
gatgagatttcagagtttttagaggaatctattcaaggaaactgcgagggtttgatggtg
aaaacattagacgtagacgccacatatgaaatcgcaagaagatcacataactggttgaag
ctcaagaaagactatcttgagggagtgggtgatactcttgatttggtggtaattggaggc
taccatggcaccggtaaacgaacgggaaaatatggcggatatttgctagcttgttacgat
gaggaaaatgaagaatatcaatccatatgcaagacaggcactggattttcagacgaacaa
ctgttaacacactccacgttcttcaaaaatcacgtgatagagaagcctcgttcctactat
cgttatggtgacaacgtaaaaccagaccattggttcgacgctgttcaggtttgggaagta
cgagctgctgatctttcaatatccccagttcacaaagctgccatgggaattgtggatccc
cataaaggaatctcgttacgatttccgcgatttttacgtgttcgagaggataaaaaacca
gaagaagccacctcggctaatcaggtcgctcaattctacaacagccagcagcaaattcaa
aacgccaacgaaggtaagaaagcagaagacgatgaccagttttactaa

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