Hydractinia symbiolongicarpus: 130648734
Help
Entry
130648734 CDS
T09218
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130648734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130648734
03012 Translation factors [BR:
hsy03012
]
130648734
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130648734
Translation factors [BR:
hsy03012
]
Eukaryotic type
Release factors
130648734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
130648734
NCBI-ProteinID:
XP_057310796
LinkDB
All DBs
Position
7:16333867..16351737
Genome browser
AA seq
564 aa
AA seq
DB search
MDSNTDMALNGVSSLSVSAKPFVPNVHATTFVPSFAQKSVTPSQPPPPQASQVSTPVEET
KNVEADDTSDNWEDNVDDVQDESNETNEKPVEEETNKETNEEEKPGERNKSQVISKPKKD
SKPPTPEPGDGKENINIIFIGHVDAGKSTIGGQLLFLTGQVDKRTLEKYEREAKEKNRET
WYLSWALDTNLEERDKGKTVECGRASFDTESKHFVLLDAPGHKSFVPNMIGGAAQADVAV
LVISARKGEFETGFERGGQTREHAMLAKTAGVKYLIILVNKMDDPTVEWAESRYQEVTSK
LTPYLKKTGFKPSEMTFMPCSGFTGANLKDKVDASVCSWYNGKSFLDHLDTLPDFEWPFD
EPVKVLISERYKDMGTIVIAKVESGTVRKGDSYMLMPNKHTVKIVAIVGADENEKNTCRA
GENVKLKLSGVEEDEVLPGFVLSDPSALCNTGQVFDAQIVILEHKSIICAGYKAVLHIHN
AVEEVTLVGLISTINRKTGEKSTTRPRFIKQDTIAIARFKTANLICMETFQAFAPMGRFT
LRDEGKTIAIGKVLNVRHKKEQAD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggattctaatacagatatggctctcaatggagtgtctagtttaagtgttagtgctaaa
ccgtttgttccaaatgttcatgccactacatttgttccatcatttgcgcaaaaatctgtc
acaccatcacaaccaccaccaccacaagcatctcaagttagtactccggttgaagaaaca
aagaacgttgaggcagatgatacttcagataactgggaagataatgttgatgatgttcaa
gatgaatccaatgaaacaaatgaaaaacctgttgaagaagaaacaaataaggaaacaaat
gaggaggaaaaacctggtgagagaaacaagtcacaagtaatttcaaaacctaaaaaagat
tccaaacctcctactccagaacctggagatggtaaagaaaacattaatatcatatttatt
ggacatgttgatgcaggaaaatcaacaattggtgggcaattattgtttttaacaggacaa
gtagataaaagaacactagaaaaatatgagagagaagccaaagaaaagaacagagaaact
tggtatctttcatgggcattagatacaaatttagaagaaagagataagggaaagactgta
gaatgtggacgagcttcttttgatacggagtcaaaacattttgttttacttgatgcacct
ggtcataaaagctttgttcccaacatgattggtggtgccgcccaagctgatgttgctgtt
ttggttatatcagcaagaaagggtgaatttgaaactggatttgaaagaggtggtcaaaca
agagagcatgccatgttagctaaaacagctggtgtaaaatatttgataatacttgttaac
aaaatggacgatcctaccgtagaatgggcggaaagcaggtatcaggaagttacttccaag
ttaacaccttatttaaagaaaactggattcaaaccaagtgaaatgacttttatgccatgc
tctggttttactggtgccaatctaaaagacaaagtagatgcatctgtctgttcttggtat
aatggtaaatccttcctagatcatctcgacacactaccagattttgagtggccttttgat
gagcctgttaaagtattgatcagtgagagatataaggatatgggtacaattgttattgcc
aaggttgaatcaggaactgtacgcaaaggcgatagttatatgttgatgccaaataaacac
actgtaaagattgtagctatagttggggctgacgagaatgaaaaaaatacatgtcgtgca
ggcgagaatgtgaaactaaagttgtctggtgtggaagaagatgaagtgttgccaggtttt
gtcctctctgatccaagtgctttatgcaacactggtcaagtttttgacgcacagattgtt
atcttggaacacaagagtattatttgtgctggatacaaagctgttttgcatattcataac
gctgttgaggaagttacacttgtgggattaataagcactatcaacagaaagacaggtgaa
aagagtacgacgagacccaggtttatcaaacaagacacgatcgctattgcacgattcaaa
accgccaatttaatctgtatggaaacatttcaagcatttgcacccatgggtagattcaca
ttacgtgacgaaggaaagacaattgctatcggtaaagtgctaaatgtacggcataagaaa
gagcaagcagattaa
DBGET
integrated database retrieval system
