Hydractinia symbiolongicarpus: 130648808
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Entry
130648808 CDS
T09218
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130648808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsy03009
]
130648808
Ribosome biogenesis [BR:
hsy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130648808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_19
TPR_8
TPR_12
Motif
Other DBs
NCBI-GeneID:
130648808
NCBI-ProteinID:
XP_057310891
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Position
7:8080369..8099840
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AA seq
595 aa
AA seq
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MAEVVFQSLEGMLPELEDLERQGLFTREELRIIIKRRTDFEYKLQKRIMDKVDILNYLEY
ELKLDLLRKKRCKRLKLKPYSTSALAVTNRIHTLFRKALLKFGDDLKLWMQYLDFCKKTE
SVRAMGSALGKMIQKHSSNQEVWLLAAKFELEEANNVENARSLLQRALRVHKLSKKLWHE
SFRLELLHVDKIKKRRKLLGVGGIELKDIDENEPKELDSFLANKTARIVFENAIKIIPDD
LRFRLDFLNVCARFEDTDELEEGICQSALADYRDEEEIHEAISKLPLIRLKKQLDRIIKD
EEWIKSEDDMSKRFQQAVTKLNTSSMWEKYLNAFGELLHESTSPQQAKRRIALIKNIFAS
AEENKLATESMYIFWIDLLVELGDTSEAMKFLCRALEMYKQNALLWKTYLLLKAGETDQW
SELKNEFKKCTSTLNQGCSEIYQMYIDCAMKVDVEETERIFEELMNGEQKDLKNLFLPQY
LDWLHSTKGIKKTRKVYKKLLQLSSELEVIEKCLSIEELQDDVSVKHVRSLHEKAVDDYG
NNNADVWLSYLKFEKQLQANDLERTGMIYNKARRTLEGKHNAEFLTRYSLLQSTQ
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagttgtatttcaaagtttggagggaatgcttcctgaattggaagatcttgaa
cggcaaggcttatttacaagagaagagttaaggatcataattaaacgaagaactgatttt
gaatacaagttacaaaaacgaatcatggataaagttgatatattgaattacttagagtac
gagttaaaattggatttgctgcggaagaaaaggtgcaagagattaaaattaaaaccttat
tccacgtcagctctggctgtgacaaacagaatacacacactcttcaggaaagcactgcta
aagtttggggatgatttaaagttatggatgcaatatttagatttttgcaagaaaacagaa
agtgttcgcgcaatgggatctgcgcttggaaaaatgattcaaaaacattcttcaaatcaa
gaagtgtggttactagctgcaaaatttgaattagaagaagcaaataatgtggaaaatgca
aggtcattgttacagcgtgcattacgtgtacataaattgtctaagaagctgtggcatgaa
tcatttcgtcttgaactacttcatgttgataagatcaaaaaacgaagaaaattacttgga
gttggtggaattgagctcaaggacattgatgaaaatgaaccaaaagaattggattcgttt
ttagcaaataaaacagcaagaattgtttttgaaaatgcaatcaaaattattccagatgat
ttacggtttcgtttggatttcttgaatgtgtgtgcacgttttgaagatacagacgaactg
gaggaagggatatgtcaaagcgcacttgctgattatcgagacgaggaagaaattcatgaa
gctatctccaaactacctcttatacggttaaaaaaacaactagacagaattataaaagat
gaagaatggataaaatcagaagacgacatgagcaaacgatttcaacaagctgttacaaaa
ctaaatacttcaagcatgtgggaaaaatatttgaatgcatttggtgaattgttgcacgaa
agcacatctccacaacaagcgaaaagaaggatagctttaataaagaatatatttgcatct
gcggaggagaacaaacttgccaccgaatcaatgtatattttttggattgatctcctggtt
gagcttggtgatacatctgaagccatgaaatttttgtgtagagcccttgaaatgtataaa
caaaatgctttactttggaaaacctatcttcttttgaaagctggcgagacagatcaatgg
agcgagttaaaaaacgaattcaaaaaatgcacatccacattaaaccaaggttgttcagaa
atatatcaaatgtatatagactgcgccatgaaagttgatgtggaagaaacagaaagaata
tttgaggaactgatgaatggagagcaaaaagatttaaaaaatctcttcttaccgcagtat
ctggactggttacacagcacgaagggtatcaagaaaacaagaaaagtttataaaaagtta
cttcaattatccagtgaactagaagtcatcgagaaatgtttaagcattgaagaattgcag
gacgatgtcagcgtaaaacatgtccgctctctccacgagaaagctgtcgatgactatgga
aacaataatgcagatgtctggctgtcttatttaaagtttgaaaaacaacttcaagctaat
gacttagaacgcactggtatgatatacaacaaagcgaggagaacattagaggggaagcac
aacgctgaatttttaacaagatactccttactacaatcaacgcaataa
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