Hydractinia symbiolongicarpus: 130649082
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Entry
130649082 CDS
T09218
Name
(RefSeq) crossover junction endonuclease EME1-like
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03440
Homologous recombination
hsy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130649082
03460 Fanconi anemia pathway
130649082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130649082
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130649082
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
ThiS
AstE_AspA_cat
Motif
Other DBs
NCBI-GeneID:
130649082
NCBI-ProteinID:
XP_057311266
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Position
7:8252843..8260711
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AA seq
528 aa
AA seq
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MDDLATSSLRKRIQNRLNSVKDVVPSLKSIPFDKEESSSDESDIDDNITLEECAKFINGR
KNHKENSFTNLTEQKTLKQKNINLKDVISQKLEDKKGKANLDQNNSTCDSLTKLRNNDNV
QLVPILVPNVESNHSEQNNNDNPMQKKKMTDEEKKLAKQQKEKEKLEKRKERERLRMEKA
MEKEMQKAIKKVHTLNNRNERKDECMERILAVIDPCLIQEKGGANILKALQDLNVRYEMK
ELPVTSCIGWMRESVDYSLKGQSEISKSSRYVEEEHVIYKMTAAEVAARINAELKELNGE
ETLNDLLLTLKREYKKKKITLVVTGMNAYHRFVKTKENQRFRDQALGVEPNAKKRKKTND
VPLLTKEDVEDAFVALQCTQSVFVRFSEDMEQFSLFIASFTKSIAEAPFKKSDETSLRFH
FSTASGKSSVKIASDGHGILEVWNQQLQQFYGVRHDTSVAITQVYPTPLSLMKAYKNASD
NEGPKLLQDIEIRRGIGVLQTQRRVGPELSKRIHKLFTSRDGNEILAR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttagctacgtcaagtctacgcaaaagaattcagaatcgtttaaattctgtt
aaagatgttgtgccttccttgaaatctattccatttgataaagaggaaagttcaagcgac
gaaagtgatattgacgataatatcacattggaagagtgtgcaaaatttataaacgggcgg
aaaaaccataaagaaaattcttttacaaatttgacggaacagaagactctaaaacaaaag
aacattaacttaaaggatgttatatcgcagaagttagaagacaagaaggggaaggctaac
ttagaccaaaataattccacatgtgacagcttgactaaacttcgaaacaacgacaatgtt
cagcttgttccaatcttggtaccaaatgttgaatcaaaccatagcgaacagaataacaat
gataacccaatgcaaaagaagaaaatgacagacgaagaaaaaaagctggcaaaacaacag
aaagaaaaagagaaattggagaaaagaaaagagagggaaaggttacgtatggaaaaagcc
atggagaaagaaatgcaaaaagcaattaaaaaggttcatactttaaacaatcgaaatgaa
agaaaagatgaatgtatggagagaatcttagctgtcattgatccatgtctcattcaagag
aaaggtggtgctaatattttgaaagcattacaagaccttaacgtgcgctatgagatgaaa
gagttgcctgtcacatcttgtattggatggatgagagaaagtgttgattacagcttgaaa
ggtcagtcagagatttcaaaatcatctcgttatgtggaagaagaacatgtcatctacaaa
atgactgctgctgaagtcgctgcaaggattaatgctgaattgaaagaactaaatggcgaa
gaaactctgaacgatctattgttgacattgaaacgtgaatacaagaagaaaaaaataaca
ttagttgtgacaggcatgaacgcgtatcacaggtttgtgaaaacgaaagaaaatcagcgt
tttcgcgatcaagcgttgggagtggaaccaaatgcgaagaagagaaagaaaacgaatgac
gtgccattgttaacaaaagaagatgttgaagatgcttttgtggctttgcaatgtactcag
agtgtttttgtacggtttagcgaagacatggagcagtttagtctgttcatcgcttctttt
acaaagtccatcgctgaagctccctttaaaaaatctgacgaaacatctctccgctttcat
ttttcaaccgcatctggcaaatcttcagttaagatcgcgagcgatggtcatggtattcta
gaggtttggaaccaacaattgcaacaattttacggtgttcgacatgatacctcagtagcg
atcacacaagtgtacccaacccctctctctttaatgaaggcgtacaaaaatgcatcagat
aatgaaggtccgaaactgcttcaagacatcgagatacgacgtgggataggtgtattgcaa
actcagcggagggttgggcccgaattatcaaaaagaatacataaattattcacatcaaga
gatggaaatgaaattttagctcgatga
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